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The map label for this gene is yibQ [H]

Identifier: 238897058

GI number: 238897058

Start: 5053744

End: 5054691

Strand: Direct

Name: yibQ [H]

Synonym: KP1_5309

Alternate gene names: 238897058

Gene position: 5053744-5054691 (Clockwise)

Preceding gene: 238897057

Following gene: 238897062

Centisome position: 96.29

GC content: 60.13

Gene sequence:

>948_bases
TTGCTTCAATTTCGCGCAATTGCTCTTGCCGTAGCCGGTTCGCTGGCTCTGGCGGCGCCAGCGTTCGCTGGCAAACTCTC
CATCGTTATTGACGATTTTGGCTACCGCCCGCAGACCGAGAATCAGGTGCTGGCGCTGCCGGCAACTATCTCCGTCGCCG
TGCTGCCGAACGCGCCGCACGCCCGGGAAATGGCCACTAAAGCGCATAATCAGGGCCATGAAGTGCTCATCCACCTGCCA
ATGGCGCCGCTCAGCAAACAGCCGCTGGAAAAAGACACCCTGCGTCCCGAAATGAGCAGCGAGGAGATCGAGCGCATTAT
TCGCGAGGCTTACGGCAAAGTCCCTTACGCCGTCGGGCTGAATAACCATATGGGCAGCGCGATGACCTCCAACCTGTTTG
GCATGCAGAAGGTGATGCAGGCCCTGGAGCGCTACAATCTCTATTTTCTCGACAGCGTCACCATCGGCAACACCCAGGCC
ATGCGCGCCGCGCAGGGTACCGGCGTGAAGGTGATTAAGCGCAAGGTGTTTCTCGACGATACGCAGAATGAAGCCGATAT
CCGCAACCAGTTCAATCGCGCCATCGCCCTGGCGCGGCGCAACGGTTCGGCGATAGCCATTGGACATCCGCATCCGACGA
CGGTGCGGGTGCTGCAGCAGATGGTCTATAACCTGCCGCCGGATATCACGCTGGTGCGCCCGAGCAGCCTGCTCAACGAG
CCGCAGGTCGACAACTCGACGCCAAACTACGCCCAGCCGCCTGCGCAACAAACGCAGCAGAAGCCGCGTAATCCGTTCCA
TGGCGTGAAGTCTTGCAAACCGAAGCGCCCGCTGGAGCCTGTGAACGCCAGCCGCTTCTTCACTATCCTCAGCGATAGCA
TCAGCCAGAGCGCGCTGATCCAGTACTATCGCCTCAAATGGCAGGGCTGGGACAACCCCGGCAACTAG

Upstream 100 bases:

>100_bases
CGTAGGCAGCAGCGGCGGTCAGGGCCGTCCGTCGCTCTATTTCGAAATTCGCCGCCAGGGTCAGGCGGTCAATCCACAGC
CGTGGTTGGGAAGATAAGTT

Downstream 100 bases:

>100_bases
ACCACTCAGGGGTCCGTTCGCTTTTGCGCGACGGGCGCCTGGTTATCTTCGTGGGCGTACCACGCCTTAAAATATTTCAG
AAAGCTGTAAAACGTCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MLQFRAIALAVAGSLALAAPAFAGKLSIVIDDFGYRPQTENQVLALPATISVAVLPNAPHAREMATKAHNQGHEVLIHLP
MAPLSKQPLEKDTLRPEMSSEEIERIIREAYGKVPYAVGLNNHMGSAMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA
MRAAQGTGVKVIKRKVFLDDTQNEADIRNQFNRAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPPDITLVRPSSLLNE
PQVDNSTPNYAQPPAQQTQQKPRNPFHGVKSCKPKRPLEPVNASRFFTILSDSISQSALIQYYRLKWQGWDNPGN

Sequences:

>Translated_315_residues
MLQFRAIALAVAGSLALAAPAFAGKLSIVIDDFGYRPQTENQVLALPATISVAVLPNAPHAREMATKAHNQGHEVLIHLP
MAPLSKQPLEKDTLRPEMSSEEIERIIREAYGKVPYAVGLNNHMGSAMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA
MRAAQGTGVKVIKRKVFLDDTQNEADIRNQFNRAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPPDITLVRPSSLLNE
PQVDNSTPNYAQPPAQQTQQKPRNPFHGVKSCKPKRPLEPVNASRFFTILSDSISQSALIQYYRLKWQGWDNPGN
>Mature_315_residues
MLQFRAIALAVAGSLALAAPAFAGKLSIVIDDFGYRPQTENQVLALPATISVAVLPNAPHAREMATKAHNQGHEVLIHLP
MAPLSKQPLEKDTLRPEMSSEEIERIIREAYGKVPYAVGLNNHMGSAMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA
MRAAQGTGVKVIKRKVFLDDTQNEADIRNQFNRAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPPDITLVRPSSLLNE
PQVDNSTPNYAQPPAQQTQQKPRNPFHGVKSCKPKRPLEPVNASRFFTILSDSISQSALIQYYRLKWQGWDNPGN

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=310, Percent_Identity=79.3548387096774, Blast_Score=496, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 34881; Mature: 34881

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQFRAIALAVAGSLALAAPAFAGKLSIVIDDFGYRPQTENQVLALPATISVAVLPNAPH
CCCHHHHHHHHHHHHHHHCCHHCCEEEEEEECCCCCCCCCCCEEEECCEEEEEEECCCCC
AREMATKAHNQGHEVLIHLPMAPLSKQPLEKDTLRPEMSSEEIERIIREAYGKVPYAVGL
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEEC
NNHMGSAMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDD
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHCCCCHHHHHHHHHCCC
TQNEADIRNQFNRAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPPDITLVRPSSLLNE
CCCHHHHHHHHHHHHHHEECCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEECCHHHCCC
PQVDNSTPNYAQPPAQQTQQKPRNPFHGVKSCKPKRPLEPVNASRFFTILSDSISQSALI
CCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QYYRLKWQGWDNPGN
HHHHEEEECCCCCCC
>Mature Secondary Structure
MLQFRAIALAVAGSLALAAPAFAGKLSIVIDDFGYRPQTENQVLALPATISVAVLPNAPH
CCCHHHHHHHHHHHHHHHCCHHCCEEEEEEECCCCCCCCCCCEEEECCEEEEEEECCCCC
AREMATKAHNQGHEVLIHLPMAPLSKQPLEKDTLRPEMSSEEIERIIREAYGKVPYAVGL
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEEC
NNHMGSAMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDD
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHCCCCHHHHHHHHHCCC
TQNEADIRNQFNRAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPPDITLVRPSSLLNE
CCCHHHHHHHHHHHHHHEECCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEECCHHHCCC
PQVDNSTPNYAQPPAQQTQQKPRNPFHGVKSCKPKRPLEPVNASRFFTILSDSISQSALI
CCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QYYRLKWQGWDNPGN
HHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]