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The map label for this gene is yibP [H]

Identifier: 238897057

GI number: 238897057

Start: 5052469

End: 5053740

Strand: Direct

Name: yibP [H]

Synonym: KP1_5307

Alternate gene names: 238897057

Gene position: 5052469-5053740 (Clockwise)

Preceding gene: 238897056

Following gene: 238897058

Centisome position: 96.26

GC content: 61.4

Gene sequence:

>1272_bases
ATGAGGGGAAAGGCGATGTATTCAACTACATGGATCGCAGCGGCAGTTCGATCCGTCCTTTACGCCAGCGCGCTCAGCGC
TGGCGTATTGCTGTGCGCGTCATCTGCGCATGCCGACGATCGCGATCAGCTAAAGTCCATCCAGGCCGACATCGCCGCCA
GGCAGCGGGCGATTAAGCAACAGCAGCAGCAGCGCGCAAGCCTGCTCGCCCAGCTCAAAGCGCAGGAAGAGGCGATCGCC
GCCGCGGCCCGCAAACTGCGCGAAACCCAGGATAGCCTGAACCAGCTCAATAAGCAGATTGACGAGATGAACGCCGCTCT
CGCGAAGCTGGAGCGCCAGCGCGCGTCTCAGGAGCGGAACCTCGCCGCGCAGCTCGATGCCGCTTTCCGCCAGGGGCCGC
ATACCGGCATCCAGATGGTGCTCAGCGGTGAAGAGGGCCAGCGCAATCAGCGGATGCAGGTCTATTTCAGCTATTTCAAC
CAGGCCCGCCAGGAGACTATCGCGGAGTTGAAGAAAACGCGCGAAGAGATGGCGGTGCAAAAGTCGATGCTCGAAGAAAA
ACAGAGCCAGCAGCAAACGCTGGTCTACGAGCAAAAGGCCCAGCAGGCGAAGCTGGAGCAGGCGCGTAACGAACGGAAAA
AGACCCTTTCCGGCCTGGAGTCGTCCATTCAGCAGGGTCAGCAACAATTAAGTGAATTACGGGCTAACGAATCGCGCCTA
CGCGGTCGTATCGCCCAGGCGGAGGCTGCCGCCAAAGCCCGCGCCGATCGGGAAGCACGCGACGCGCAGGCGGTGCGCGA
CCGCCAGCAGGAAGCATCGCGCAAAGGCACTACCTATAAACCAACGGAAAGTGAGCGTTCGCTGATGTCACGCACCGGCG
GGCTGGGCTCGCCGCGCGGTCAGGCGTTCTGGCCGGTTCGCGGTCCGCTCCTTCATCGATATGGCGAACAGCTGCAAGGT
GAACTACGTTGGAAAGGGATGGTTATCGCCGCGTCTGAAGGCACCGAAGTCAGAGCCATTGCCGATGGTCGGGTCATTCT
GGCCGACTGGCTGCAGGGCTATGGTCTGGTGGTGGTGGTCGAACATGGCAAAGGCGACATGAGCCTGTATGGCTATAACC
AAAGCGCGCTGGTCAGCGTTGGTACCCAGGTGCGTGCCGGCCAGCCTATCGCGCTCGTAGGCAGCAGCGGCGGTCAGGGC
CGTCCGTCGCTCTATTTCGAAATTCGCCGCCAGGGTCAGGCGGTCAATCCACAGCCGTGGTTGGGAAGATAA

Upstream 100 bases:

>100_bases
ACTTTCCGACATCGCCCCGACCATGCTGTCGCTGATGGGAATGGAAATCCCGCAAGAGATGACTGGCAAGCCGCTGTTCA
TCGTGGAATAATCCTTCCCC

Downstream 100 bases:

>100_bases
GTTTTGCTTCAATTTCGCGCAATTGCTCTTGCCGTAGCCGGTTCGCTGGCTCTGGCGGCGCCAGCGTTCGCTGGCAAACT
CTCCATCGTTATTGACGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MRGKAMYSTTWIAAAVRSVLYASALSAGVLLCASSAHADDRDQLKSIQADIAARQRAIKQQQQQRASLLAQLKAQEEAIA
AAARKLRETQDSLNQLNKQIDEMNAALAKLERQRASQERNLAAQLDAAFRQGPHTGIQMVLSGEEGQRNQRMQVYFSYFN
QARQETIAELKKTREEMAVQKSMLEEKQSQQQTLVYEQKAQQAKLEQARNERKKTLSGLESSIQQGQQQLSELRANESRL
RGRIAQAEAAAKARADREARDAQAVRDRQQEASRKGTTYKPTESERSLMSRTGGLGSPRGQAFWPVRGPLLHRYGEQLQG
ELRWKGMVIAASEGTEVRAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGTQVRAGQPIALVGSSGGQG
RPSLYFEIRRQGQAVNPQPWLGR

Sequences:

>Translated_423_residues
MRGKAMYSTTWIAAAVRSVLYASALSAGVLLCASSAHADDRDQLKSIQADIAARQRAIKQQQQQRASLLAQLKAQEEAIA
AAARKLRETQDSLNQLNKQIDEMNAALAKLERQRASQERNLAAQLDAAFRQGPHTGIQMVLSGEEGQRNQRMQVYFSYFN
QARQETIAELKKTREEMAVQKSMLEEKQSQQQTLVYEQKAQQAKLEQARNERKKTLSGLESSIQQGQQQLSELRANESRL
RGRIAQAEAAAKARADREARDAQAVRDRQQEASRKGTTYKPTESERSLMSRTGGLGSPRGQAFWPVRGPLLHRYGEQLQG
ELRWKGMVIAASEGTEVRAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGTQVRAGQPIALVGSSGGQG
RPSLYFEIRRQGQAVNPQPWLGR
>Mature_423_residues
MRGKAMYSTTWIAAAVRSVLYASALSAGVLLCASSAHADDRDQLKSIQADIAARQRAIKQQQQQRASLLAQLKAQEEAIA
AAARKLRETQDSLNQLNKQIDEMNAALAKLERQRASQERNLAAQLDAAFRQGPHTGIQMVLSGEEGQRNQRMQVYFSYFN
QARQETIAELKKTREEMAVQKSMLEEKQSQQQTLVYEQKAQQAKLEQARNERKKTLSGLESSIQQGQQQLSELRANESRL
RGRIAQAEAAAKARADREARDAQAVRDRQQEASRKGTTYKPTESERSLMSRTGGLGSPRGQAFWPVRGPLLHRYGEQLQG
ELRWKGMVIAASEGTEVRAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGTQVRAGQPIALVGSSGGQG
RPSLYFEIRRQGQAVNPQPWLGR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=409, Percent_Identity=85.5745721271394, Blast_Score=681, Evalue=0.0,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=39.4957983193277, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI87082174, Length=127, Percent_Identity=33.0708661417323, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 46901; Mature: 46901

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKAMYSTTWIAAAVRSVLYASALSAGVLLCASSAHADDRDQLKSIQADIAARQRAIKQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHH
QQQQRASLLAQLKAQEEAIAAAARKLRETQDSLNQLNKQIDEMNAALAKLERQRASQERN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAQLDAAFRQGPHTGIQMVLSGEEGQRNQRMQVYFSYFNQARQETIAELKKTREEMAVQ
HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSMLEEKQSQQQTLVYEQKAQQAKLEQARNERKKTLSGLESSIQQGQQQLSELRANESRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGRIAQAEAAAKARADREARDAQAVRDRQQEASRKGTTYKPTESERSLMSRTGGLGSPRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
QAFWPVRGPLLHRYGEQLQGELRWKGMVIAASEGTEVRAIADGRVILADWLQGYGLVVVV
CEECCCCCHHHHHHHHHHCCCCEECEEEEEECCCCEEEEEECCCEEHHHHHHCCCEEEEE
EHGKGDMSLYGYNQSALVSVGTQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPW
ECCCCCEEEEECCCHHHHHHCCHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCC
LGR
CCC
>Mature Secondary Structure
MRGKAMYSTTWIAAAVRSVLYASALSAGVLLCASSAHADDRDQLKSIQADIAARQRAIKQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHH
QQQQRASLLAQLKAQEEAIAAAARKLRETQDSLNQLNKQIDEMNAALAKLERQRASQERN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAQLDAAFRQGPHTGIQMVLSGEEGQRNQRMQVYFSYFNQARQETIAELKKTREEMAVQ
HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSMLEEKQSQQQTLVYEQKAQQAKLEQARNERKKTLSGLESSIQQGQQQLSELRANESRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGRIAQAEAAAKARADREARDAQAVRDRQQEASRKGTTYKPTESERSLMSRTGGLGSPRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
QAFWPVRGPLLHRYGEQLQGELRWKGMVIAASEGTEVRAIADGRVILADWLQGYGLVVVV
CEECCCCCHHHHHHHHHHCCCCEECEEEEEECCCCEEEEEECCCEEHHHHHHCCCEEEEE
EHGKGDMSLYGYNQSALVSVGTQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPW
ECCCCCEEEEECCCHHHHHHCCHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCC
LGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]