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The map label for this gene is yibO [H]

Identifier: 238897056

GI number: 238897056

Start: 5050834

End: 5052459

Strand: Direct

Name: yibO [H]

Synonym: KP1_5306

Alternate gene names: 238897056

Gene position: 5050834-5052459 (Clockwise)

Preceding gene: 238897050

Following gene: 238897057

Centisome position: 96.23

GC content: 58.18

Gene sequence:

>1626_bases
TTGATCTTTCACGGGGATTTAAACGATTCAGCTGTAGTAAAATTACGCAAAATTTCTGTCTTTGAGCATGAGGTTGTCGC
AATGTCGGTTTCTAAAAAACCTATGGTACTGGTGATTCTGGATGGCTACGGCTATCGCGAAGACCAACAGGATAACGCCA
TTTATAGCGCTAAAACGCCGGTAATGGACGCGCTATGGGCCAAACGTCCACATACCCTGATCGATGCATCCGGCCTCGAA
GTCGGCCTGCCGGACCGTCAGATGGGGAACTCCGAAGTAGGCCACGTCAACCTGGGCGCCGGTCGTATCGTCTATCAGGA
CCTGACCCGTCTCGATGTGGAAATTAAAGAACGCACCTTCTTCGCCAACCCGGTACTGACCGCCGCGGTCGATAAAGCGG
TTGCCGCCGGCAAAGCAGTACATATCATGGGCCTGATGTCGCCAGGCGGCGTCCACAGCCACGAAGATCACATCATGGCG
ATGGTGGAGCTGGCGGCAGAGCGCGGCGCTGAGAAGATCTACCTGCACGCCTTCCTCGACGGCCGTGATACGCCGCCGCG
CAGTGCGGAAAAAACGCTGGCGACATTCGAAGCCAAATTTGCCGCGCTGGGCAAAGGTCGCATCGCGTCGCTCATCGGCC
GCTATTACGCCATGGACCGCGACAACCGCTGGGATCGCGTGGAACAAGCTTATGATCTGCTGACCCTGGCCAAAGGCGAA
TTCCAGGCCGATACCGCCGTCGCGGGTCTGCAGGCCGCCTACGCCCGTGACGAAAACGACGAATTCGTGAAAGCCACCGT
TATCCGCGCCGCCGGCCAGGCCGATGCCGCGATGGAAGACGGCGACGCGCTGATCTTCATGAACTTCCGTGCCGACCGCG
CGCGTGAAATCACCCGCGCCTTCGTCAACGCCGACTTCGACGGCTTTGCGCGTAAGAAAGTGGTTAATCTCGATTTCGTG
ATGCTCACCGAATACGCCGCCGACATCAAAGTCGCCTGCGCCTACCCGCCCGCCTCGCTGGCCAATACCTTCGGCGAGTG
GATGGCGAAGCACGATAAAACCCAGCTGCGCATCTCCGAAACTGAAAAATACGCTCACGTCACCTTCTTCTTCAACGGCG
GCGTAGAAGAGCCGTTTAAAGGCGAAGAGCGGATCCTGATTAACTCGCCGAAAGTGGCGACCTACGATCTGCAGCCGGAA
ATGAGCTCCGCCGAGCTGACTGAGAAACTGGTCGCCGCCATCAAAGGCGGAAAATACGACACCATCATCTGTAACTACCC
GAACGGCGATATGGTTGGCCATACCGGGGTGATGGAAGCAGCCGTAAAAGCGGTTGAAGCGCTGGATCGCTGCATCGACC
AGGTGGCTCAGGCGGTGGAATCCGTTGGCGGCCAGCTGCTGATCACCGCCGACCACGGCAACGCCGAGCAGATGCGCGAC
CCGGCCACCGGCCAGGCGCACACCGCCCATACCAATCTGCCGGTTCCGCTGATCTACGTCGGTAATAAAGCGGTCAAAGC
GGTCAACGGCGGCAAACTTTCCGACATCGCCCCGACCATGCTGTCGCTGATGGGAATGGAAATCCCGCAAGAGATGACTG
GCAAGCCGCTGTTCATCGTGGAATAA

Upstream 100 bases:

>100_bases
GCAATTACAGCCAGTGAGCGCGATGTAATGTATTTTCTGCGGGCGGTGGCGAAAAAAAGCCGCTCTCGCTGACCCGGCGC
GGCCCGGCCGCTCCCTTTCT

Downstream 100 bases:

>100_bases
TCCTTCCCCATGAGGGGAAAGGCGATGTATTCAACTACATGGATCGCAGCGGCAGTTCGATCCGTCCTTTACGCCAGCGC
GCTCAGCGCTGGCGTATTGC

Product: phosphoglyceromutase

Products: NA

Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MIFHGDLNDSAVVKLRKISVFEHEVVAMSVSKKPMVLVILDGYGYREDQQDNAIYSAKTPVMDALWAKRPHTLIDASGLE
VGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTAAVDKAVAAGKAVHIMGLMSPGGVHSHEDHIMA
MVELAAERGAEKIYLHAFLDGRDTPPRSAEKTLATFEAKFAALGKGRIASLIGRYYAMDRDNRWDRVEQAYDLLTLAKGE
FQADTAVAGLQAAYARDENDEFVKATVIRAAGQADAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNLDFV
MLTEYAADIKVACAYPPASLANTFGEWMAKHDKTQLRISETEKYAHVTFFFNGGVEEPFKGEERILINSPKVATYDLQPE
MSSAELTEKLVAAIKGGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDRCIDQVAQAVESVGGQLLITADHGNAEQMRD
PATGQAHTAHTNLPVPLIYVGNKAVKAVNGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE

Sequences:

>Translated_541_residues
MIFHGDLNDSAVVKLRKISVFEHEVVAMSVSKKPMVLVILDGYGYREDQQDNAIYSAKTPVMDALWAKRPHTLIDASGLE
VGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTAAVDKAVAAGKAVHIMGLMSPGGVHSHEDHIMA
MVELAAERGAEKIYLHAFLDGRDTPPRSAEKTLATFEAKFAALGKGRIASLIGRYYAMDRDNRWDRVEQAYDLLTLAKGE
FQADTAVAGLQAAYARDENDEFVKATVIRAAGQADAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNLDFV
MLTEYAADIKVACAYPPASLANTFGEWMAKHDKTQLRISETEKYAHVTFFFNGGVEEPFKGEERILINSPKVATYDLQPE
MSSAELTEKLVAAIKGGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDRCIDQVAQAVESVGGQLLITADHGNAEQMRD
PATGQAHTAHTNLPVPLIYVGNKAVKAVNGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE
>Mature_541_residues
MIFHGDLNDSAVVKLRKISVFEHEVVAMSVSKKPMVLVILDGYGYREDQQDNAIYSAKTPVMDALWAKRPHTLIDASGLE
VGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTAAVDKAVAAGKAVHIMGLMSPGGVHSHEDHIMA
MVELAAERGAEKIYLHAFLDGRDTPPRSAEKTLATFEAKFAALGKGRIASLIGRYYAMDRDNRWDRVEQAYDLLTLAKGE
FQADTAVAGLQAAYARDENDEFVKATVIRAAGQADAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNLDFV
MLTEYAADIKVACAYPPASLANTFGEWMAKHDKTQLRISETEKYAHVTFFFNGGVEEPFKGEERILINSPKVATYDLQPE
MSSAELTEKLVAAIKGGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDRCIDQVAQAVESVGGQLLITADHGNAEQMRD
PATGQAHTAHTNLPVPLIYVGNKAVKAVNGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]

COG id: COG0696

COG function: function code G; Phosphoglyceromutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]

Homologues:

Organism=Escherichia coli, GI1790041, Length=514, Percent_Identity=92.6070038910506, Blast_Score=988, Evalue=0.0,
Organism=Caenorhabditis elegans, GI32564249, Length=520, Percent_Identity=45.5769230769231, Blast_Score=439, Evalue=1e-123,
Organism=Caenorhabditis elegans, GI17507741, Length=520, Percent_Identity=45.5769230769231, Blast_Score=439, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR011258
- InterPro:   IPR006124
- InterPro:   IPR005995 [H]

Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 59058; Mature: 59058

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFHGDLNDSAVVKLRKISVFEHEVVAMSVSKKPMVLVILDGYGYREDQQDNAIYSAKTP
CEEECCCCCCCEEEEEEEEHEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEECCCC
VMDALWAKRPHTLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTF
HHHHHHCCCCCCEEECCCCEECCCCCCCCCCCCCEEECCCCHHHHHHHHHCCEEEECEEE
FANPVLTAAVDKAVAAGKAVHIMGLMSPGGVHSHEDHIMAMVELAAERGAEKIYLHAFLD
ECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEC
GRDTPPRSAEKTLATFEAKFAALGKGRIASLIGRYYAMDRDNRWDRVEQAYDLLTLAKGE
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
FQADTAVAGLQAAYARDENDEFVKATVIRAAGQADAAMEDGDALIFMNFRADRAREITRA
CCCHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
FVNADFDGFARKKVVNLDFVMLTEYAADIKVACAYPPASLANTFGEWMAKHDKTQLRISE
HHCCCCCCHHHHEEECCEEEEEEHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEC
TEKYAHVTFFFNGGVEEPFKGEERILINSPKVATYDLQPEMSSAELTEKLVAAIKGGKYD
CCCEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCEE
TIICNYPNGDMVGHTGVMEAAVKAVEALDRCIDQVAQAVESVGGQLLITADHGNAEQMRD
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCC
PATGQAHTAHTNLPVPLIYVGNKAVKAVNGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIV
CCCCCCEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHCCCCEEEE
E
C
>Mature Secondary Structure
MIFHGDLNDSAVVKLRKISVFEHEVVAMSVSKKPMVLVILDGYGYREDQQDNAIYSAKTP
CEEECCCCCCCEEEEEEEEHEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEECCCC
VMDALWAKRPHTLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTF
HHHHHHCCCCCCEEECCCCEECCCCCCCCCCCCCEEECCCCHHHHHHHHHCCEEEECEEE
FANPVLTAAVDKAVAAGKAVHIMGLMSPGGVHSHEDHIMAMVELAAERGAEKIYLHAFLD
ECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEC
GRDTPPRSAEKTLATFEAKFAALGKGRIASLIGRYYAMDRDNRWDRVEQAYDLLTLAKGE
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
FQADTAVAGLQAAYARDENDEFVKATVIRAAGQADAAMEDGDALIFMNFRADRAREITRA
CCCHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
FVNADFDGFARKKVVNLDFVMLTEYAADIKVACAYPPASLANTFGEWMAKHDKTQLRISE
HHCCCCCCHHHHEEECCEEEEEEHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEC
TEKYAHVTFFFNGGVEEPFKGEERILINSPKVATYDLQPEMSSAELTEKLVAAIKGGKYD
CCCEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCEE
TIICNYPNGDMVGHTGVMEAAVKAVEALDRCIDQVAQAVESVGGQLLITADHGNAEQMRD
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCC
PATGQAHTAHTNLPVPLIYVGNKAVKAVNGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIV
CCCCCCEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHCCCCEEEE
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA