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The map label for this gene is yiaB [H]

Identifier: 238897027

GI number: 238897027

Start: 5018898

End: 5019269

Strand: Reverse

Name: yiaB [H]

Synonym: KP1_5274

Alternate gene names: 238897027

Gene position: 5019269-5018898 (Counterclockwise)

Preceding gene: 238897028

Following gene: 238897026

Centisome position: 95.63

GC content: 57.26

Gene sequence:

>372_bases
ATGATCACAAAACGCAATATTGCCAGGGGGATGATGGCGACAGGATCGCTGGTTTATCTGCTCGGTATCTGGCGGACCTG
CCCGCTGTTCAGCGGCAAAGGGTATTTTCTCGGCGTGCTGGTGATGGGGATGTTTGCTGTTCTCGCCCATCAGCGCGCCA
GTCAGTGGCAGGAACAGGACGACGGTTTTATTGCCTTATGCCGGCTGGTGCTGCTGCTATCGGTCGGCCTGCTGCTGGTC
GGCGCCTGGTATGTACCGGCAGACTGGCATGAAAAAGCCGTCTATATCGCGGCATGGTTTGTCTGCTTATATGGCGCATC
GGCAACCCCCGAACGGACCCGCATCGCCCGCGCGATGCAAAAAACGGAATAA

Upstream 100 bases:

>100_bases
GCGTATTTATTTATTCCGAAATCTCCGCTTTGTCGTACGTAATCTGAGGCATCGCCGAGGGAGTCGGTCATAATCAGCCC
CTGTCGACCAGGGAGGTGAG

Downstream 100 bases:

>100_bases
GCGCCGCCCCGAGGCGCGTAAAAGGTAAAAAGTGATGGAAAACAAGCACGCGACGTATTCTCCTGCGTTTCATTTGATCT
CCTGGATTACCCTGATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MITKRNIARGMMATGSLVYLLGIWRTCPLFSGKGYFLGVLVMGMFAVLAHQRASQWQEQDDGFIALCRLVLLLSVGLLLV
GAWYVPADWHEKAVYIAAWFVCLYGASATPERTRIARAMQKTE

Sequences:

>Translated_123_residues
MITKRNIARGMMATGSLVYLLGIWRTCPLFSGKGYFLGVLVMGMFAVLAHQRASQWQEQDDGFIALCRLVLLLSVGLLLV
GAWYVPADWHEKAVYIAAWFVCLYGASATPERTRIARAMQKTE
>Mature_123_residues
MITKRNIARGMMATGSLVYLLGIWRTCPLFSGKGYFLGVLVMGMFAVLAHQRASQWQEQDDGFIALCRLVLLLSVGLLLV
GAWYVPADWHEKAVYIAAWFVCLYGASATPERTRIARAMQKTE

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082293, Length=105, Percent_Identity=44.7619047619048, Blast_Score=104, Evalue=2e-24,
Organism=Escherichia coli, GI87082292, Length=108, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 13759; Mature: 13759

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKRNIARGMMATGSLVYLLGIWRTCPLFSGKGYFLGVLVMGMFAVLAHQRASQWQEQD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGFIALCRLVLLLSVGLLLVGAWYVPADWHEKAVYIAAWFVCLYGASATPERTRIARAMQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KTE
HCC
>Mature Secondary Structure
MITKRNIARGMMATGSLVYLLGIWRTCPLFSGKGYFLGVLVMGMFAVLAHQRASQWQEQD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGFIALCRLVLLLSVGLLLVGAWYVPADWHEKAVYIAAWFVCLYGASATPERTRIARAMQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KTE
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]