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The map label for this gene is yhjY [H]

Identifier: 238897006

GI number: 238897006

Start: 4997472

End: 4998149

Strand: Reverse

Name: yhjY [H]

Synonym: KP1_5251

Alternate gene names: 238897006

Gene position: 4998149-4997472 (Counterclockwise)

Preceding gene: 238897009

Following gene: 238897005

Centisome position: 95.23

GC content: 59.59

Gene sequence:

>678_bases
TTGCCGATTCGGCTCTTTTCTGGAGTCGCATTAATGATAATAAAGAAATGCAATGGCCTCCGGGGGTTCTTGATCCCGGC
GAGCGTATCCGTCTGGGTGTCATGTGTCTCTGGAGCGAATGCCTGGCAACAGGAATATATCGCTATCGATACAAAAAGTA
ATACGTCGGAACGCTATACATGGGATAGCGATCACCAACCACGTTATGAAGATATTCTCGCCGAGCGGATGAAGTCCTCT
GAGACGCCCGGCGGGCTGGCGTTAAACCAGGGGCTGGCGCCGCCGGACAGCGGCCGTGGCCTGAGCGTTGGCTGGAATTA
CCCGCTAGCAAACGGCGTAACCTCCGGGCCGGTGGCCAGCCTGCGCAGCGACGTCACCGCGCCGACGGTGAGAAGCGCAG
GCGAGGTGGGCTACGTTAACACGCTCGGCTGGCGCATGGATTATCAGGCGCTGTGGGGCGTGCATCCCTGGGCGCAGGTG
AGCTATAACCAGTCGCTCGCCAGCGATGTCTGGGCGCCGATGACCCGTGCCAGGGAGGGAGGCTGGAGCGATGTCACCCT
GGGCGCTGATATGCGGTTGGGATCCCACGTGGCGGCATGGGCAACGCTGTCGCAGGCGGATAACCTGCCGTCAGGGGAAA
ATACGCTCTATTTGATGGGGGTCAGCGCCAATTTTTAA

Upstream 100 bases:

>100_bases
TCCCTCTGCGCTAAAAAAGTGGACGCCCGCCTTGACGGCTGAAAGATAAAGATAATAGTTAATACAGGGAAATCGTATCC
CCACTAAAAACACAGCAATA

Downstream 100 bases:

>100_bases
TCGGGAATTGTTACGCATTTGAAACGATGTGGTTATTGTTAAATCTCAGCAATGGCGCATTTCTGTGAGATAGCGCACAC
TAACTTTTTGCCTGTAATTT

Product: putative lipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MPIRLFSGVALMIIKKCNGLRGFLIPASVSVWVSCVSGANAWQQEYIAIDTKSNTSERYTWDSDHQPRYEDILAERMKSS
ETPGGLALNQGLAPPDSGRGLSVGWNYPLANGVTSGPVASLRSDVTAPTVRSAGEVGYVNTLGWRMDYQALWGVHPWAQV
SYNQSLASDVWAPMTRAREGGWSDVTLGADMRLGSHVAAWATLSQADNLPSGENTLYLMGVSANF

Sequences:

>Translated_225_residues
MPIRLFSGVALMIIKKCNGLRGFLIPASVSVWVSCVSGANAWQQEYIAIDTKSNTSERYTWDSDHQPRYEDILAERMKSS
ETPGGLALNQGLAPPDSGRGLSVGWNYPLANGVTSGPVASLRSDVTAPTVRSAGEVGYVNTLGWRMDYQALWGVHPWAQV
SYNQSLASDVWAPMTRAREGGWSDVTLGADMRLGSHVAAWATLSQADNLPSGENTLYLMGVSANF
>Mature_224_residues
PIRLFSGVALMIIKKCNGLRGFLIPASVSVWVSCVSGANAWQQEYIAIDTKSNTSERYTWDSDHQPRYEDILAERMKSSE
TPGGLALNQGLAPPDSGRGLSVGWNYPLANGVTSGPVASLRSDVTAPTVRSAGEVGYVNTLGWRMDYQALWGVHPWAQVS
YNQSLASDVWAPMTRAREGGWSDVTLGADMRLGSHVAAWATLSQADNLPSGENTLYLMGVSANF

Specific function: Unknown

COG id: COG5571

COG function: function code N; Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI87082287, Length=235, Percent_Identity=43.4042553191489, Blast_Score=168, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR016955 [H]

Pfam domain/function: PF03797 Autotransporter [H]

EC number: NA

Molecular weight: Translated: 24328; Mature: 24196

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRLFSGVALMIIKKCNGLRGFLIPASVSVWVSCVSGANAWQQEYIAIDTKSNTSERYT
CCEEHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
WDSDHQPRYEDILAERMKSSETPGGLALNQGLAPPDSGRGLSVGWNYPLANGVTSGPVAS
CCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHH
LRSDVTAPTVRSAGEVGYVNTLGWRMDYQALWGVHPWAQVSYNQSLASDVWAPMTRAREG
HHHCCCCCHHHCCCCCCEEECCCCEECHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHCCC
GWSDVTLGADMRLGSHVAAWATLSQADNLPSGENTLYLMGVSANF
CCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
PIRLFSGVALMIIKKCNGLRGFLIPASVSVWVSCVSGANAWQQEYIAIDTKSNTSERYT
CEEHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
WDSDHQPRYEDILAERMKSSETPGGLALNQGLAPPDSGRGLSVGWNYPLANGVTSGPVAS
CCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHH
LRSDVTAPTVRSAGEVGYVNTLGWRMDYQALWGVHPWAQVSYNQSLASDVWAPMTRAREG
HHHCCCCCHHHCCCCCCEEECCCCEECHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHCCC
GWSDVTLGADMRLGSHVAAWATLSQADNLPSGENTLYLMGVSANF
CCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]