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The map label for this gene is arnF [H]

Identifier: 238896938

GI number: 238896938

Start: 4911491

End: 4911871

Strand: Reverse

Name: arnF [H]

Synonym: KP1_5178

Alternate gene names: 238896938

Gene position: 4911871-4911491 (Counterclockwise)

Preceding gene: 238896939

Following gene: 238896936

Centisome position: 93.59

GC content: 61.94

Gene sequence:

>381_bases
ATGGGCTTTTTCTGGGCATTACTCAGCGTCGGCCTCGTCAGCGCCGCGCAGTTGCTGCTGCGCAGCGCCATGGTGGCCTT
GCCGCCGCTGACCGATATTGTGGCATTTCTCCAGCATCTGCTGCATTTCCAGCCCGGGACTTTCGGCCTGTTTTTCGGCC
TGCTGGGCTACCTGCTGTCGATGGTCTGCTGGTACTTTGCCCTCCATCGCCTGCCGCTGTCGAAAGCGTATGCGCTACTG
AGCCTGAGCTATATCCTCGTGTGGGCCGCCGCCATCTGGCTGCCCGGCTGGCATGAGCCGTTCTACTGGCAATCGCTGCT
GGGCGTGGCGATCATCGTCGCCGGCGTATTGACCATCTTCTGGCCGGTGAAACGCCGCTAG

Upstream 100 bases:

>100_bases
TCGCGGGCTGGGGCATCTGGCATGAGCCGGTCGCCCGTCGCCACTGGCTTGGCGTCGGGTTGATCGTCGTGGGCATTGTC
ATTCTGGGGACCAGCGTCTG

Downstream 100 bases:

>100_bases
CCGGGGAGCCGGCTTTTGGGACGGCCCGGGCCGAGCAGGATCGCCAGCTTGCTGCCTCCGACGGTGGTTTCCATCCAGAT
TTTACAGACGCTGGTTAACG

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF [H]

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MGFFWALLSVGLVSAAQLLLRSAMVALPPLTDIVAFLQHLLHFQPGTFGLFFGLLGYLLSMVCWYFALHRLPLSKAYALL
SLSYILVWAAAIWLPGWHEPFYWQSLLGVAIIVAGVLTIFWPVKRR

Sequences:

>Translated_126_residues
MGFFWALLSVGLVSAAQLLLRSAMVALPPLTDIVAFLQHLLHFQPGTFGLFFGLLGYLLSMVCWYFALHRLPLSKAYALL
SLSYILVWAAAIWLPGWHEPFYWQSLLGVAIIVAGVLTIFWPVKRR
>Mature_125_residues
GFFWALLSVGLVSAAQLLLRSAMVALPPLTDIVAFLQHLLHFQPGTFGLFFGLLGYLLSMVCWYFALHRLPLSKAYALLS
LSYILVWAAAIWLPGWHEPFYWQSLLGVAIIVAGVLTIFWPVKRR

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArnF family [H]

Homologues:

Organism=Escherichia coli, GI87082075, Length=126, Percent_Identity=51.5873015873016, Blast_Score=97, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR022832 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 14206; Mature: 14075

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFWALLSVGLVSAAQLLLRSAMVALPPLTDIVAFLQHLLHFQPGTFGLFFGLLGYLLS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MVCWYFALHRLPLSKAYALLSLSYILVWAAAIWLPGWHEPFYWQSLLGVAIIVAGVLTIF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
WPVKRR
HHHCCC
>Mature Secondary Structure 
GFFWALLSVGLVSAAQLLLRSAMVALPPLTDIVAFLQHLLHFQPGTFGLFFGLLGYLLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MVCWYFALHRLPLSKAYALLSLSYILVWAAAIWLPGWHEPFYWQSLLGVAIIVAGVLTIF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
WPVKRR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA