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The map label for this gene is ugpQ [H]

Identifier: 238896906

GI number: 238896906

Start: 4880775

End: 4881515

Strand: Reverse

Name: ugpQ [H]

Synonym: KP1_5143

Alternate gene names: 238896906

Gene position: 4881515-4880775 (Counterclockwise)

Preceding gene: 238896907

Following gene: 238896904

Centisome position: 93.01

GC content: 63.43

Gene sequence:

>741_bases
ATGAGTAACTGGCCTTATCCCCGCATCGTCGCCCATCGCGGCGGCGGTAAACTGGCGCCGGAGAACACCCTGGCGGCTAT
CGACGTCGGCGCCCGCTACGGGCACACGATGATTGAATTTGACGCCAAGCTGTCGAAGGACGGGCAGATCTTTCTGCTGC
ATGACGATAATCTCGAACGCACCAGCAATGGCTGGGGCGTGGCGGGCGAGCTGGCGTGGGACGATCTGCTGAAGGTCGAT
GCCGGTAGCTGGTTCAGCCGTGAATTTAAGGGCGAGCCGCTGCCGTTGCTCTCCCAGGTGGCGGAGCGCTGCCGTCGTCA
CGGCATGATGGCGAATATCGAAATTAAGCCGACCACCGGGCTGGGGCCGCAGACCGGCAGAGTGGTGGCGCTGGCCGCGC
GCGATCTATGGCAAGGCATGACCGCGCCGCTGCTCTCCTCTTTTGAAATCGACGCCCTGGAGGCGGCGCAGGAAGCCGCG
CCCGAGCTGCCGCGCGGGCTGCTGCTGGATGAGTGGCGCGATGACTGGCGCGAATTGACCACCCGGTTGGGCTGCGTGTC
GATGCACCTCAATCACAAACTGCTGGATGCGGCGCGGGTGGCGAGCCTGAAACAGGCCGGCCTGCACATTCTGGTGTACA
CGGTCAATAAACCCCAGCGCGCCGCCGAACTGCTGTGCTGGGGCGTAGACTGCATCTGCACCGATGCCATTGATGTCATC
GGGCCGAATTTCCAGCCTTAA

Upstream 100 bases:

>100_bases
GACTGCCGCACCAGCAGCGCCCGGCGGCAGGCAGCACGCTATGGCTGCATCTGCCTTTGGAACATCTGCACCTCTTTGAT
GGTGAAACAGGACAACGCGC

Downstream 100 bases:

>100_bases
GACGGATTTGCGGCGGACGACCTTTACGGATTAGTCTGCCGCAGCATTCCACCGTTGTTATTTGGCCGCACCTGCTGCGG
CGCATTCAGATTGCCGCCCT

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSNWPYPRIVAHRGGGKLAPENTLAAIDVGARYGHTMIEFDAKLSKDGQIFLLHDDNLERTSNGWGVAGELAWDDLLKVD
AGSWFSREFKGEPLPLLSQVAERCRRHGMMANIEIKPTTGLGPQTGRVVALAARDLWQGMTAPLLSSFEIDALEAAQEAA
PELPRGLLLDEWRDDWRELTTRLGCVSMHLNHKLLDAARVASLKQAGLHILVYTVNKPQRAAELLCWGVDCICTDAIDVI
GPNFQP

Sequences:

>Translated_246_residues
MSNWPYPRIVAHRGGGKLAPENTLAAIDVGARYGHTMIEFDAKLSKDGQIFLLHDDNLERTSNGWGVAGELAWDDLLKVD
AGSWFSREFKGEPLPLLSQVAERCRRHGMMANIEIKPTTGLGPQTGRVVALAARDLWQGMTAPLLSSFEIDALEAAQEAA
PELPRGLLLDEWRDDWRELTTRLGCVSMHLNHKLLDAARVASLKQAGLHILVYTVNKPQRAAELLCWGVDCICTDAIDVI
GPNFQP
>Mature_245_residues
SNWPYPRIVAHRGGGKLAPENTLAAIDVGARYGHTMIEFDAKLSKDGQIFLLHDDNLERTSNGWGVAGELAWDDLLKVDA
GSWFSREFKGEPLPLLSQVAERCRRHGMMANIEIKPTTGLGPQTGRVVALAARDLWQGMTAPLLSSFEIDALEAAQEAAP
ELPRGLLLDEWRDDWRELTTRLGCVSMHLNHKLLDAARVASLKQAGLHILVYTVNKPQRAAELLCWGVDCICTDAIDVIG
PNFQP

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=116, Percent_Identity=35.3448275862069, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI284055245, Length=97, Percent_Identity=41.2371134020619, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI284055240, Length=97, Percent_Identity=41.2371134020619, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI284055242, Length=97, Percent_Identity=41.2371134020619, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI21361649, Length=97, Percent_Identity=41.2371134020619, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1789858, Length=244, Percent_Identity=88.5245901639344, Blast_Score=450, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27144; Mature: 27013

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNWPYPRIVAHRGGGKLAPENTLAAIDVGARYGHTMIEFDAKLSKDGQIFLLHDDNLER
CCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEECCEECCCCEEEEEECCCCCC
TSNGWGVAGELAWDDLLKVDAGSWFSREFKGEPLPLLSQVAERCRRHGMMANIEIKPTTG
CCCCCCEECHHHHHHHHEECCCCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCC
LGPQTGRVVALAARDLWQGMTAPLLSSFEIDALEAAQEAAPELPRGLLLDEWRDDWRELT
CCCCCCCEEEEEHHHHHCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TRLGCVSMHLNHKLLDAARVASLKQAGLHILVYTVNKPQRAAELLCWGVDCICTDAIDVI
HHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHC
GPNFQP
CCCCCC
>Mature Secondary Structure 
SNWPYPRIVAHRGGGKLAPENTLAAIDVGARYGHTMIEFDAKLSKDGQIFLLHDDNLER
CCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEECCEECCCCEEEEEECCCCCC
TSNGWGVAGELAWDDLLKVDAGSWFSREFKGEPLPLLSQVAERCRRHGMMANIEIKPTTG
CCCCCCEECHHHHHHHHEECCCCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCC
LGPQTGRVVALAARDLWQGMTAPLLSSFEIDALEAAQEAAPELPRGLLLDEWRDDWRELT
CCCCCCCEEEEEHHHHHCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TRLGCVSMHLNHKLLDAARVASLKQAGLHILVYTVNKPQRAAELLCWGVDCICTDAIDVI
HHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHC
GPNFQP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]