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The map label for this gene is yhgF [H]

Identifier: 238896874

GI number: 238896874

Start: 4839002

End: 4841332

Strand: Direct

Name: yhgF [H]

Synonym: KP1_5108

Alternate gene names: 238896874

Gene position: 4839002-4841332 (Clockwise)

Preceding gene: 238896873

Following gene: 238896875

Centisome position: 92.2

GC content: 61.65

Gene sequence:

>2331_bases
ATGATGAATGATTCGCTCTGCCGCATTATTGCGGGTGAACTTCAGGCCAGAGCCGAACAGGTAGAAGCTGCCGTTCGCCT
GCTTGATGAAGGGAACACCGTGCCGTTTATTGCACGTTATCGTAAAGAAGTCACCGGCGGTCTGGATGACACGCAGCTGC
GTAATCTGGAAACTCGCCTCGGCTATCTGCGCGAACTCGAAGACCGTCGTCAGGCGATCCTCAAATCCATCGCTGAACAG
GGCAAACTGACCGACGCGCTGGAAAAAGCCATCAACACCACGCTCAGCAAAACCGAACTGGAAGATCTCTACCTGCCCTA
CAAGCCGAAGCGCCGTACACGCGGGCAGATCGCTATCGAAGCCGGGCTCGAACCGCTGGCTGACCTGCTGTGGAACGAAC
CGGCCCACGATCCGGAAGCGGAGGCCGCAAAATATATTGATGCCGATAAGGGCGTAGCCGACAGCAAAGCGGCCCTGGAC
GGCGCGCGCTATATTCTGATGGAGCGGTTTGCCGAAGACGCCGCGCTGCTGGCGAAGGTCCGTGACTATCTGTGGAAAAA
CGCCCACCTGGTCTCCACCGTCGTCAGCGGTAAAGAAGAGGAAGGCGCTAAATTCCGCGACTACTTCGATCACCATGAAC
CGATCGCCGCCGTGCCGTCGCATCGCGCGCTGGCGATGTTCCGCGGTCGCAACGAAGGCGTCCTGCAGCTCTCTTTAAAC
GCTGACCCGCAGTTTGACGAGCCGCCGAAAGAGAGCCACGGCGAGCAAATTATTATCGACCACCTGGGCCTGCGCCTGAA
TAACGCCCCGGCGGACAGCTGGCGTAAAGGCGTCGTCAGCTGGACCTGGCGGATCAAAGTCCTGATGCATCTCGAAACCG
AGCTGATGGGCACCGTGCGCGAACGCGCGGAGGACGAGGCAATCAACGTCTTCGCCCGCAACCTGCACGATCTGCTGATG
GCCGCGCCCGCCGGGCTGCGCGCCACCATGGGACTCGATCCGGGCCTGCGCACCGGGGTGAAAGTGGCCGTCGTCGACGC
CACCGGTAAACTGGTCGCTACCGATACCATCTATCCCCACACCGGCCAGGCCGCCAAAGCGGCCGTCGCCGTCGCCGCGC
TGTGTGAGAAGTACAACGTTGAGCTGGTGGCCATCGGCAACGGTACCGCCTCGCGTGAAACCGAGCGTTTCTTCCTCGAC
GTGCAGAAACAGTTCCCGAAGGTCACCGCCCAGAAGGTGATCGTCAGCGAAGCCGGGGCTTCCGTTTACTCCGCCTCCGA
GCTGGCGGCGCAGGAGTTTCCGGACCTCGACGTGTCGCTGCGCGGCGCGGTCTCCATCGCCCGCCGTCTGCAGGATCCCC
TGGCCGAGCTGGTGAAAATCGACCCGAAATCCATTGGCGTCGGCCAGTATCAGCACGACGTCAGCCAGACCCAGCTGGCG
CGTAAGCTGGACGCGGTGGTGGAAGACTGTGTGAACGCCGTCGGCGTTGACCTGAACACCGCCTCCGTTCCGCTGCTGAC
CCGCGTCGCCGGCCTGACCCGCATGATGGCGCAGAACATCGTCGCCTGGCGCGACGAGAATGGTCAGTTCCAGAACCGCC
AGCAGCTGCTGAAAGTCAGCCGTCTGGGGCCGAAAGCCTTTGAACAGTGCGCGGGCTTCCTGCGTATCAACCACGGCGAC
AACCCGCTGGATGCCTCCACCGTTCACCCGGAAGCTTACCCGGTGGTCGAACGTATTCTGGCCGCCACCCAGCAGGCGCT
GAAAGATCTGATGGGCAATAGCAGTGCGCTGCGCCACCTGAAGGCAGTGGACTTCACCGATGAGAAGTTTGGCGTCCCGA
CGGTCACCGACATTATCAAAGAGCTGGAAAAACCGGGCCGCGATCCGCGTCCGGAGTTTAAGACCGCGAAGTTCGCCGAT
GGTGTGGAGACCATGAATGACCTGCTGCCGGGAATGATTCTGGAAGGTGCCGTCACCAACGTCACCAACTTCGGCGCGTT
TGTTGATATCGGCGTTCATCAGGACGGACTGGTACACATTTCGTCGCTTTCTGACCGGTTTGTTGAGGATCCGCACACCG
TGGTGAAAGCGGGCGACATCGTCAAGGTCAAAGTGATGGAAGTCGATCTGCCGCGTAAGCGTATCGCCCTGACCATGCGT
CTCGACGAGCAGCCGGGCGACAGCAACGCCCGCCGCGGCGGTGGTCAGGAGCGCCCGCAGGGAAATCGCCCGGCAGCGAA
AGCCGCCAAACCCCGCGGTCGCGAGGCGCAGCCTGCCGGCAACAGCGCGATGATGGATGCCCTCGCCGCAGCGATGGGTA
AAAAACGCTAA

Upstream 100 bases:

>100_bases
ACAAGAACTTTCCGAGAGACGCCCGGCGCGGCTGGTATTTTTAGCCGTCAGTCCGTATAACTAGTCCCTGTTTTTTGACC
CTAAAGATGAATTAAAAGCC

Downstream 100 bases:

>100_bases
ACTCTCCCTGCCCCTTTTTCAGGGGCAGTTTTTTTCATGACCAGGCCATCGCCATCACGCGCAAAACAGGTTCAGTTGTT
TCTGATAACCTGCTTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 776; Mature: 776

Protein sequence:

>776_residues
MMNDSLCRIIAGELQARAEQVEAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRNLETRLGYLRELEDRRQAILKSIAEQ
GKLTDALEKAINTTLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNEPAHDPEAEAAKYIDADKGVADSKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPIAAVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESHGEQIIIDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAVAVAALCEKYNVELVAIGNGTASRETERFFLD
VQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSALRHLKAVDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAKFAD
GVETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHTVVKAGDIVKVKVMEVDLPRKRIALTMR
LDEQPGDSNARRGGGQERPQGNRPAAKAAKPRGREAQPAGNSAMMDALAAAMGKKR

Sequences:

>Translated_776_residues
MMNDSLCRIIAGELQARAEQVEAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRNLETRLGYLRELEDRRQAILKSIAEQ
GKLTDALEKAINTTLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNEPAHDPEAEAAKYIDADKGVADSKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPIAAVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESHGEQIIIDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAVAVAALCEKYNVELVAIGNGTASRETERFFLD
VQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSALRHLKAVDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAKFAD
GVETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHTVVKAGDIVKVKVMEVDLPRKRIALTMR
LDEQPGDSNARRGGGQERPQGNRPAAKAAKPRGREAQPAGNSAMMDALAAAMGKKR
>Mature_776_residues
MMNDSLCRIIAGELQARAEQVEAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRNLETRLGYLRELEDRRQAILKSIAEQ
GKLTDALEKAINTTLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNEPAHDPEAEAAKYIDADKGVADSKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPIAAVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESHGEQIIIDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAVAVAALCEKYNVELVAIGNGTASRETERFFLD
VQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSALRHLKAVDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAKFAD
GVETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHTVVKAGDIVKVKVMEVDLPRKRIALTMR
LDEQPGDSNARRGGGQERPQGNRPAAKAAKPRGREAQPAGNSAMMDALAAAMGKKR

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=777, Percent_Identity=35.006435006435, Blast_Score=404, Evalue=1e-112,
Organism=Homo sapiens, GI27597090, Length=399, Percent_Identity=25.8145363408521, Blast_Score=95, Evalue=3e-19,
Organism=Escherichia coli, GI87082262, Length=776, Percent_Identity=93.9432989690722, Blast_Score=1460, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=100, Percent_Identity=37, Blast_Score=66, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17511129, Length=713, Percent_Identity=28.4712482468443, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17552892, Length=294, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321552, Length=229, Percent_Identity=26.2008733624454, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI62484314, Length=781, Percent_Identity=30.4737516005122, Blast_Score=350, Evalue=2e-96,
Organism=Drosophila melanogaster, GI24640080, Length=414, Percent_Identity=23.9130434782609, Blast_Score=99, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 85055; Mature: 85055

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNDSLCRIIAGELQARAEQVEAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRNLETRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
GYLRELEDRRQAILKSIAEQGKLTDALEKAINTTLSKTELEDLYLPYKPKRRTRGQIAIE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
AGLEPLADLLWNEPAHDPEAEAAKYIDADKGVADSKAALDGARYILMERFAEDAALLAKV
CCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPIAAVPSHRALAMFRGRNEGVLQLSLN
HHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHEECCCCCEEEEEEC
ADPQFDEPPKESHGEQIIIDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR
CCCCCCCCCCCCCCCEEEEECCCCEECCCCCHHHHCCCEEEEEEEHHHHHHHHHHHHHHH
ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCC
TGQAAKAAVAVAALCEKYNVELVAIGNGTASRETERFFLDVQKQFPKVTAQKVIVSEAGA
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCC
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSALRHL
HCCHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KAVDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAKFADGVETMNDLLPGMILEGAVTN
HHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHTVVKAGDIVKVKVMEVDLPRKRIALTMR
HHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHEECCCEEEEEEEEECCCHHHEEEEEE
LDEQPGDSNARRGGGQERPQGNRPAAKAAKPRGREAQPAGNSAMMDALAAAMGKKR
ECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMNDSLCRIIAGELQARAEQVEAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRNLETRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
GYLRELEDRRQAILKSIAEQGKLTDALEKAINTTLSKTELEDLYLPYKPKRRTRGQIAIE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
AGLEPLADLLWNEPAHDPEAEAAKYIDADKGVADSKAALDGARYILMERFAEDAALLAKV
CCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPIAAVPSHRALAMFRGRNEGVLQLSLN
HHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHEECCCCCEEEEEEC
ADPQFDEPPKESHGEQIIIDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR
CCCCCCCCCCCCCCCEEEEECCCCEECCCCCHHHHCCCEEEEEEEHHHHHHHHHHHHHHH
ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCC
TGQAAKAAVAVAALCEKYNVELVAIGNGTASRETERFFLDVQKQFPKVTAQKVIVSEAGA
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCC
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSALRHL
HCCHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KAVDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAKFADGVETMNDLLPGMILEGAVTN
HHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHTVVKAGDIVKVKVMEVDLPRKRIALTMR
HHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHEECCCEEEEEEEEECCCHHHEEEEEE
LDEQPGDSNARRGGGQERPQGNRPAAKAAKPRGREAQPAGNSAMMDALAAAMGKKR
ECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]