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The map label for this gene is smf [H]

Identifier: 238896782

GI number: 238896782

Start: 4763885

End: 4765009

Strand: Reverse

Name: smf [H]

Synonym: KP1_5004

Alternate gene names: 238896782

Gene position: 4765009-4763885 (Counterclockwise)

Preceding gene: 238896788

Following gene: 238896781

Centisome position: 90.79

GC content: 59.02

Gene sequence:

>1125_bases
ATGACGCCCGACGAGATTTGGCTGCGGCTGATGAAGGTCAGTAGCTTGTATGGCGACAGGATGGTAGAGATCGCTCAGCG
CTTATGCGCAGCCGCCAGCGTTGATCGTGAAGCGCTGCATGCCGTCGGGATGACCGCGGCGCAGGCAAAGTTATTTTTCC
GGCTTGACGAGCATGAGCTTGACGAGACGCGGCGCTGGCTGGGACAACCGGATCATCATCTGTTACGGGGTGACGATCCG
CGCTATCCATTGCGGTTAAAGGCTATCGCTGATTACCCCGGCGCGTTGCTGGTCAGCGGCGGCCTCGCCCTGCTTCACAG
CGCGCAGCTTGCCGTTATTGGCAGTCGCTCGCACTCCTGGTATGGCGCCCGCTGGGGGAAACTGTTCAGCGAAACGCTGG
CGCAGAAAGGGATTACCATCACCAGTGGGCTGGCGTTAGGCATTGACGGGGTCGCGCACCGCGGCGCGCTGGCGGCGGAG
GGTAAAACTATCGCGGTACTGGGCAATGGGCTGAGTCAGGTTTATCCGCGGCGCCATGCAACCCTCGCCCGGCAGATCAT
CGACAATGGCGGTACGCTGGTATCTGAATTTCCACTCATTACGCCGCCGCTTCCCGCACATTTCCCCAGGCGCAACCGGA
TTATCAGCGGCTTAAGCCTGGGCGTGCTGGTGATTGAGGCGGCGTTGCGAAGCGGATCGCTGGTCACCGTCCGCTGCGCC
CTGGAGCAGGGAAGGGATGTGTTCGCCCTGCCTGGCCCGATAGGCAATCCGGGATCGGAAGGCCCGCACTGGTTAATTAA
GCAAGGCGCGGTGCCAGTGACCTCGCCAGAGGATATTGTGGAATACTGGCATAACGAGCTGGCCTGGCTGACTGATACGT
CTGATTCGATAAATATTTGCGTCGATCAGCCGTCTGTAGCATTGCCATTTCCGGAGCTCCTGGCTAACGTAGGAGATGAG
GTAACACCTGTTGACGTTGTCGCTGAACGTGCCGGCCAATCTGTGCCAGTAACCGTAGCTCAGCTACTTGAACTGGAGTT
AGCAGGCTGGATCGCAGCTGTACCCGGCGGCTATGTCCGATTAAGGAGGGCAAGCCATGTTCGACGTACTCATGTATTTG
TTTGA

Upstream 100 bases:

>100_bases
ATAAGATTATTAGCTCTATTCTAGACAAAACCCCCTGCAATTGACAGTCTCACTGTCCAATCGCAAAGATTGTCAATACC
GCTTATGGCAGGGGGTAAGG

Downstream 100 bases:

>100_bases
AACTTACATCCATAGCGAAGCAGAAATGCGCGTGGATCAGGACAAACTGACGCGGGATCTTACCGATGCGGGTTTTGAGC
GGGAAGACATCTATAACGCG

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTPDEIWLRLMKVSSLYGDRMVEIAQRLCAAASVDREALHAVGMTAAQAKLFFRLDEHELDETRRWLGQPDHHLLRGDDP
RYPLRLKAIADYPGALLVSGGLALLHSAQLAVIGSRSHSWYGARWGKLFSETLAQKGITITSGLALGIDGVAHRGALAAE
GKTIAVLGNGLSQVYPRRHATLARQIIDNGGTLVSEFPLITPPLPAHFPRRNRIISGLSLGVLVIEAALRSGSLVTVRCA
LEQGRDVFALPGPIGNPGSEGPHWLIKQGAVPVTSPEDIVEYWHNELAWLTDTSDSINICVDQPSVALPFPELLANVGDE
VTPVDVVAERAGQSVPVTVAQLLELELAGWIAAVPGGYVRLRRASHVRRTHVFV

Sequences:

>Translated_374_residues
MTPDEIWLRLMKVSSLYGDRMVEIAQRLCAAASVDREALHAVGMTAAQAKLFFRLDEHELDETRRWLGQPDHHLLRGDDP
RYPLRLKAIADYPGALLVSGGLALLHSAQLAVIGSRSHSWYGARWGKLFSETLAQKGITITSGLALGIDGVAHRGALAAE
GKTIAVLGNGLSQVYPRRHATLARQIIDNGGTLVSEFPLITPPLPAHFPRRNRIISGLSLGVLVIEAALRSGSLVTVRCA
LEQGRDVFALPGPIGNPGSEGPHWLIKQGAVPVTSPEDIVEYWHNELAWLTDTSDSINICVDQPSVALPFPELLANVGDE
VTPVDVVAERAGQSVPVTVAQLLELELAGWIAAVPGGYVRLRRASHVRRTHVFV
>Mature_373_residues
TPDEIWLRLMKVSSLYGDRMVEIAQRLCAAASVDREALHAVGMTAAQAKLFFRLDEHELDETRRWLGQPDHHLLRGDDPR
YPLRLKAIADYPGALLVSGGLALLHSAQLAVIGSRSHSWYGARWGKLFSETLAQKGITITSGLALGIDGVAHRGALAAEG
KTIAVLGNGLSQVYPRRHATLARQIIDNGGTLVSEFPLITPPLPAHFPRRNRIISGLSLGVLVIEAALRSGSLVTVRCAL
EQGRDVFALPGPIGNPGSEGPHWLIKQGAVPVTSPEDIVEYWHNELAWLTDTSDSINICVDQPSVALPFPELLANVGDEV
TPVDVVAERAGQSVPVTVAQLLELELAGWIAAVPGGYVRLRRASHVRRTHVFV

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=374, Percent_Identity=66.5775401069519, Blast_Score=492, Evalue=1e-140,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 40481; Mature: 40350

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDEIWLRLMKVSSLYGDRMVEIAQRLCAAASVDREALHAVGMTAAQAKLFFRLDEHEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHEEEEEECHHHH
DETRRWLGQPDHHLLRGDDPRYPLRLKAIADYPGALLVSGGLALLHSAQLAVIGSRSHSW
HHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEHHCCHHHHHCCEEEEEECCCCCC
YGARWGKLFSETLAQKGITITSGLALGIDGVAHRGALAAEGKTIAVLGNGLSQVYPRRHA
HHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHCCCEECCCCEEEEECCCHHHHCCHHHH
TLARQIIDNGGTLVSEFPLITPPLPAHFPRRNRIISGLSLGVLVIEAALRSGSLVTVRCA
HHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
LEQGRDVFALPGPIGNPGSEGPHWLIKQGAVPVTSPEDIVEYWHNELAWLTDTSDSINIC
ECCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCEEEE
VDQPSVALPFPELLANVGDEVTPVDVVAERAGQSVPVTVAQLLELELAGWIAAVPGGYVR
ECCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEE
LRRASHVRRTHVFV
HHHHHHHHHHHCCC
>Mature Secondary Structure 
TPDEIWLRLMKVSSLYGDRMVEIAQRLCAAASVDREALHAVGMTAAQAKLFFRLDEHEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHEEEEEECHHHH
DETRRWLGQPDHHLLRGDDPRYPLRLKAIADYPGALLVSGGLALLHSAQLAVIGSRSHSW
HHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEHHCCHHHHHCCEEEEEECCCCCC
YGARWGKLFSETLAQKGITITSGLALGIDGVAHRGALAAEGKTIAVLGNGLSQVYPRRHA
HHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHCCCEECCCCEEEEECCCHHHHCCHHHH
TLARQIIDNGGTLVSEFPLITPPLPAHFPRRNRIISGLSLGVLVIEAALRSGSLVTVRCA
HHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
LEQGRDVFALPGPIGNPGSEGPHWLIKQGAVPVTSPEDIVEYWHNELAWLTDTSDSINIC
ECCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCEEEE
VDQPSVALPFPELLANVGDEVTPVDVVAERAGQSVPVTVAQLLELELAGWIAAVPGGYVR
ECCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEE
LRRASHVRRTHVFV
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8432722; 8112305; 9278503 [H]