Click here to switch to the map view.

The map label for this gene is gatB [H]

Identifier: 238896648

GI number: 238896648

Start: 4627740

End: 4628024

Strand: Direct

Name: gatB [H]

Synonym: KP1_4853

Alternate gene names: 238896648

Gene position: 4627740-4628024 (Clockwise)

Preceding gene: 238896647

Following gene: 238896649

Centisome position: 88.17

GC content: 56.84

Gene sequence:

>285_bases
ATGAAACGTAAAGTTATCGTCGCCTGCGGCGGTGCCGTCGCCACCTCCACGATGGCGGCAGAAGAGATTAAAGAGCTATG
TGCAGACCACAATATTGAACTGGATTTGGTGCAGTGCCGGGTCAATGAAATCGAAACCTACATGGACGGGGCGGACCTGA
TCTGCACCACCGCGCGCGTGGAGCGGACCTTCGGCGACATTCCGGTGGTGCACGGCATGCCATTCGTCTCGGGCGTCGGC
ATTGAAGCCTTACAACAGAAAATCCTCGGCATCCTCGCGGAGTAA

Upstream 100 bases:

>100_bases
CTTCCGACGATCGGCTGCCGGTGCGGTTCCAGCAATTAATCCTTGAGCCCGAGCTTAGCGCCGTGGCTTCATAAGATACT
GATAATAAAAGGGGTACCCT

Downstream 100 bases:

>100_bases
ACGCCATGTTTAGCGAAATCATGCGTTATATCCTCGATCTCGGTCCGACGGTGATGCTGCCGATCGTGATCATTATCTTC
TCCAAATTACTGGGGATGAA

Product: PTS system galactitol-specific transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Gat; PTS system galactitol-specific EIIB component [H]

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKRKVIVACGGAVATSTMAAEEIKELCADHNIELDLVQCRVNEIETYMDGADLICTTARVERTFGDIPVVHGMPFVSGVG
IEALQQKILGILAE

Sequences:

>Translated_94_residues
MKRKVIVACGGAVATSTMAAEEIKELCADHNIELDLVQCRVNEIETYMDGADLICTTARVERTFGDIPVVHGMPFVSGVG
IEALQQKILGILAE
>Mature_94_residues
MKRKVIVACGGAVATSTMAAEEIKELCADHNIELDLVQCRVNEIETYMDGADLICTTARVERTFGDIPVVHGMPFVSGVG
IEALQQKILGILAE

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3414

COG function: function code G; Phosphotransferase system, galactitol-specific IIB component

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1788409, Length=92, Percent_Identity=81.5217391304348, Blast_Score=163, Evalue=2e-42,
Organism=Escherichia coli, GI87082416, Length=92, Percent_Identity=35.8695652173913, Blast_Score=69, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013011
- InterPro:   IPR003501 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 10119; Mature: 10119

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVIVACGGAVATSTMAAEEIKELCADHNIELDLVQCRVNEIETYMDGADLICTTARV
CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCEEHHHHH
ERTFGDIPVVHGMPFVSGVGIEALQQKILGILAE
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRKVIVACGGAVATSTMAAEEIKELCADHNIELDLVQCRVNEIETYMDGADLICTTARV
CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCEEHHHHH
ERTFGDIPVVHGMPFVSGVGIEALQQKILGILAE
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]