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The map label for this gene is yqjD [H]

Identifier: 238896623

GI number: 238896623

Start: 4605997

End: 4606302

Strand: Direct

Name: yqjD [H]

Synonym: KP1_4824

Alternate gene names: 238896623

Gene position: 4605997-4606302 (Clockwise)

Preceding gene: 238896622

Following gene: 238896624

Centisome position: 87.76

GC content: 56.54

Gene sequence:

>306_bases
ATGGCTAAAGAGAATGTGACTGACGACCTTCGTGCAGAACTGAAAACGCTGGCGGATACCCTGGAGGAAGTACTAAATTC
CTCGGCGGACAAGTCGAAAGAAGAGATGGGTAAACTGCGCAGTAAAGCCGAGAGCGCGCTGAAAGAGAGCCGCGCTCGTT
TGGGTGAAACCAGCGAAGCGATTCTTCGTCAAACTCGTGAGACCGCCGCGCGAGCGGATGATTATGTTCGCGAAAATCCG
TGGACTGGGGTAGGAATTGGCGCCGCCGTCGGGCTGGTGCTGGGTGTCCTGCTGTCGCGTCGCTGA

Upstream 100 bases:

>100_bases
TAAACTCAATGAAGCGCAACAGGAGTTAAAAACGCTGGAGTCTCGGGATTACTAATCACCATTAACTTTCGCAACACGGA
CCACGCTACAGGAGAACGAC

Downstream 100 bases:

>100_bases
TTATGGCGAATACTCAACACACGCAGGGACCGGGTCAGCGCGTTTTCTCCATTGGTCAGCGCATCGTCACGCTGCTGGTC
GAAATGGTGGAAACGCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MAKENVTDDLRAELKTLADTLEEVLNSSADKSKEEMGKLRSKAESALKESRARLGETSEAILRQTRETAARADDYVRENP
WTGVGIGAAVGLVLGVLLSRR

Sequences:

>Translated_101_residues
MAKENVTDDLRAELKTLADTLEEVLNSSADKSKEEMGKLRSKAESALKESRARLGETSEAILRQTRETAARADDYVRENP
WTGVGIGAAVGLVLGVLLSRR
>Mature_100_residues
AKENVTDDLRAELKTLADTLEEVLNSSADKSKEEMGKLRSKAESALKESRARLGETSEAILRQTRETAARADDYVRENPW
TGVGIGAAVGLVLGVLLSRR

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli elaB and ygaM [H]

Homologues:

Organism=Escherichia coli, GI1789485, Length=101, Percent_Identity=75.2475247524752, Blast_Score=155, Evalue=5e-40,
Organism=Escherichia coli, GI1789027, Length=94, Percent_Identity=44.6808510638298, Blast_Score=74, Evalue=1e-15,
Organism=Escherichia coli, GI1788601, Length=72, Percent_Identity=38.8888888888889, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010279 [H]

Pfam domain/function: PF05957 DUF883 [H]

EC number: NA

Molecular weight: Translated: 11016; Mature: 10884

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKENVTDDLRAELKTLADTLEEVLNSSADKSKEEMGKLRSKAESALKESRARLGETSEA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ILRQTRETAARADDYVRENPWTGVGIGAAVGLVLGVLLSRR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKENVTDDLRAELKTLADTLEEVLNSSADKSKEEMGKLRSKAESALKESRARLGETSEA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ILRQTRETAARADDYVRENPWTGVGIGAAVGLVLGVLLSRR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]