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The map label for this gene is ygjR [H]

Identifier: 238896612

GI number: 238896612

Start: 4593994

End: 4594983

Strand: Direct

Name: ygjR [H]

Synonym: KP1_4813

Alternate gene names: 238896612

Gene position: 4593994-4594983 (Clockwise)

Preceding gene: 238896611

Following gene: 238896613

Centisome position: 87.53

GC content: 56.77

Gene sequence:

>990_bases
ATGATACGTTTCGCAGTTGTTGGCACAAACTGGATCACCAAGCAGTTTGTCGATGCCGCCCATGAAACCGGCAAATATAA
ACTTACCGCCATCTACTCCCGCAGCCTCGAACAGGCGCAAGCCTTCGCCAAAGACTATCCGGTCGAGCATCTGTTTACCT
CGCTCGATGAACTGGCACAGAGCCCTGACGTTGACGCGGTCTATATTGCCAGCCCGAACTCGCTGCACTTTCCGCAGACC
CGGCTGTTCCTGAGCCATAAGAAGCACGTCATTTGCGAAAAGCCGCTGGCGTCGAACCTGCAGGAAGTCGAGGCGGCGAT
AGCGCTGGCGAAAGAAAATAACGTGGTGCTGTTTGAAGCCTTTAAAACCGCCAGTCTGCCTAACTTTCTCCTACTGAAAG
AAACGCTCGCTAAAGTGGGCAAACTACGCAAAGCCTTTATCAACTACTGTCAGTACTCCTCACGCTATCAGCGCTACCTT
GACGGCGAAAACCCCAACACCTTTAACCCGGCGTTCTCTAACGGTTCGATTATGGATATCGGCTTCTATTGCCTGGCGTC
CGCTGTGGCGCTGTGGGGCGAGCCGCGGGCCGTTCTTGCCACCGCCAGCCTGCTGGACAGCGGCGTAGACGCCCAGGGCA
CCGTGGTGCTGAGCTATGGCGACTTCGACGTGACGCTGCATCACTCCAAAGTTAGCGATTCCGCGATCCCCAGTGAAATT
CAGGGCGAAGACGGCGCGTTAGTGATCGAAAAAATCTCCGAATGTCAGAAGCTGGCGTTTGTGCCGCGCGGCGGTAAAGC
CCAGGACCTGACGCAGCCCCAGCACATTAATACCATGCTGTATGAAGCGGAGACCTTTGCGCGGCTGGTGGAGACACAGG
ATGTGGATCACCCGGGCCTGGCGGTGAGCCGGATCACCGCCAAACTGTCCAGCGAAATTCGTCGCCAGACCGGGGTGATC
TTCCCGGCCGATACGCAGCCGCTGGCGTAA

Upstream 100 bases:

>100_bases
CACCTTTCGTTAAATCGTTCTGCGTAGTGACGCACTGGTTTTGTCATGACGGCATGATAGAGTGGCGGCAGGTTCCCTTT
AACGGAGTTCGTCAACGTTT

Downstream 100 bases:

>100_bases
AAGAGTGTAAAGGCCTGACCGGCCGCCATTGACGAAAACCGCCCTGTGACATATTTTGTTACGTGCAAAGGGGAGTAACT
TCCTTGCCGGTTGATCGTCA

Product: putative NAD(P)-binding dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MIRFAVVGTNWITKQFVDAAHETGKYKLTAIYSRSLEQAQAFAKDYPVEHLFTSLDELAQSPDVDAVYIASPNSLHFPQT
RLFLSHKKHVICEKPLASNLQEVEAAIALAKENNVVLFEAFKTASLPNFLLLKETLAKVGKLRKAFINYCQYSSRYQRYL
DGENPNTFNPAFSNGSIMDIGFYCLASAVALWGEPRAVLATASLLDSGVDAQGTVVLSYGDFDVTLHHSKVSDSAIPSEI
QGEDGALVIEKISECQKLAFVPRGGKAQDLTQPQHINTMLYEAETFARLVETQDVDHPGLAVSRITAKLSSEIRRQTGVI
FPADTQPLA

Sequences:

>Translated_329_residues
MIRFAVVGTNWITKQFVDAAHETGKYKLTAIYSRSLEQAQAFAKDYPVEHLFTSLDELAQSPDVDAVYIASPNSLHFPQT
RLFLSHKKHVICEKPLASNLQEVEAAIALAKENNVVLFEAFKTASLPNFLLLKETLAKVGKLRKAFINYCQYSSRYQRYL
DGENPNTFNPAFSNGSIMDIGFYCLASAVALWGEPRAVLATASLLDSGVDAQGTVVLSYGDFDVTLHHSKVSDSAIPSEI
QGEDGALVIEKISECQKLAFVPRGGKAQDLTQPQHINTMLYEAETFARLVETQDVDHPGLAVSRITAKLSSEIRRQTGVI
FPADTQPLA
>Mature_329_residues
MIRFAVVGTNWITKQFVDAAHETGKYKLTAIYSRSLEQAQAFAKDYPVEHLFTSLDELAQSPDVDAVYIASPNSLHFPQT
RLFLSHKKHVICEKPLASNLQEVEAAIALAKENNVVLFEAFKTASLPNFLLLKETLAKVGKLRKAFINYCQYSSRYQRYL
DGENPNTFNPAFSNGSIMDIGFYCLASAVALWGEPRAVLATASLLDSGVDAQGTVVLSYGDFDVTLHHSKVSDSAIPSEI
QGEDGALVIEKISECQKLAFVPRGGKAQDLTQPQHINTMLYEAETFARLVETQDVDHPGLAVSRITAKLSSEIRRQTGVI
FPADTQPLA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=350, Percent_Identity=25.1428571428571, Blast_Score=98, Evalue=8e-21,
Organism=Escherichia coli, GI145693182, Length=328, Percent_Identity=80.1829268292683, Blast_Score=552, Evalue=1e-159,
Organism=Drosophila melanogaster, GI24581117, Length=350, Percent_Identity=28, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24581115, Length=338, Percent_Identity=23.6686390532544, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24584727, Length=304, Percent_Identity=26.6447368421053, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36243; Mature: 36243

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFAVVGTNWITKQFVDAAHETGKYKLTAIYSRSLEQAQAFAKDYPVEHLFTSLDELAQ
CEEEEEECCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
SPDVDAVYIASPNSLHFPQTRLFLSHKKHVICEKPLASNLQEVEAAIALAKENNVVLFEA
CCCCCEEEEECCCCCCCCHHHHHHHCCCCEEECCHHHCCHHHHHHHHHEECCCCEEEEEE
FKTASLPNFLLLKETLAKVGKLRKAFINYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDI
CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHH
GFYCLASAVALWGEPRAVLATASLLDSGVDAQGTVVLSYGDFDVTLHHSKVSDSAIPSEI
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCC
QGEDGALVIEKISECQKLAFVPRGGKAQDLTQPQHINTMLYEAETFARLVETQDVDHPGL
CCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVSRITAKLSSEIRRQTGVIFPADTQPLA
HHHHHHHHHHHHHHHHCCCEECCCCCCCC
>Mature Secondary Structure
MIRFAVVGTNWITKQFVDAAHETGKYKLTAIYSRSLEQAQAFAKDYPVEHLFTSLDELAQ
CEEEEEECCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
SPDVDAVYIASPNSLHFPQTRLFLSHKKHVICEKPLASNLQEVEAAIALAKENNVVLFEA
CCCCCEEEEECCCCCCCCHHHHHHHCCCCEEECCHHHCCHHHHHHHHHEECCCCEEEEEE
FKTASLPNFLLLKETLAKVGKLRKAFINYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDI
CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHH
GFYCLASAVALWGEPRAVLATASLLDSGVDAQGTVVLSYGDFDVTLHHSKVSDSAIPSEI
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCC
QGEDGALVIEKISECQKLAFVPRGGKAQDLTQPQHINTMLYEAETFARLVETQDVDHPGL
CCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVSRITAKLSSEIRRQTGVIFPADTQPLA
HHHHHHHHHHHHHHHHCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]