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The map label for this gene is ureF [H]

Identifier: 238896565

GI number: 238896565

Start: 4543019

End: 4543693

Strand: Direct

Name: ureF [H]

Synonym: KP1_4760

Alternate gene names: 238896565

Gene position: 4543019-4543693 (Clockwise)

Preceding gene: 238896564

Following gene: 238896566

Centisome position: 86.56

GC content: 67.41

Gene sequence:

>675_bases
ATGTCGACAGCGGAACAACGCCTGCGGCTGATGCAGCTGGCCAGCAGCAACCTGCCGGTTGGGGGTTACAGCTGGTCCCA
GGGGCTGGAGTGGGCTGTGGAAGCCGGCTGGGTGCCGGACGTCGCGGCCTTCGAGCGCTGGCAGCGACGCCAGATGACGG
AAGGCTTTTTTACCGTTGACCTGCCGCTGTTCGCCCGCCTGTACCGCGCCTGCGAACAAGGCGATATCGCTGCGGCCCAG
CGCTGGACCGCCTATCTGCTGGCCTGCCGGGAAACTCGTGAACTGCGGGAGGAAGAGCGCAACCGCGGCGCGGCGTTTGC
CCGTCTGCTGATCGACTGGCAGCCGGACTGTCCGCCGCCGTGGCGCACGCTGTGCCAGCAAAGCCAGCTCGCCGGGATGG
CCTGGCTCGGCGTGCGCTGGCGTATCGCCCTGCCCGAGATGGCCCTCAGCCTGGGCTACAGCTGGATTGAGAGCGCCGTG
ATGGCCGGCGTCAAGCTGGTCCCCTTCGGCCAGCAGGCCGCCCAGCAGCTGATTTTACGTCTTTGTGACCACTACGCGGC
CGAGATGCCCCGCGCGCTGGCCGCGCCGGACGGCGATATCGGATCGGCCACCCCGCTCGCCGCTATCGCCTCTGCCCGGC
ATGAAACCCAATACTCTCGATTATTCCGTTCCTAG

Upstream 100 bases:

>100_bases
TTTGGCCAGCTGCCGTTCGAGCCGGAAGCCGGCGCTTACGCCAGCGAGAGCCACGGTCATCATCATGCTCATCATGACCA
CCACGCTCACAGCCACTAGC

Downstream 100 bases:

>100_bases
GAGAAGCCATGAACTCTTATAAACACCCGCTGCGCGTCGGCGTCGGCGGCCCGGTCGGCTCCGGTAAAACCGCTCTGCTG
GAAGCACTGTGTAAAGCGAT

Product: urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSTAEQRLRLMQLASSNLPVGGYSWSQGLEWAVEAGWVPDVAAFERWQRRQMTEGFFTVDLPLFARLYRACEQGDIAAAQ
RWTAYLLACRETRELREEERNRGAAFARLLIDWQPDCPPPWRTLCQQSQLAGMAWLGVRWRIALPEMALSLGYSWIESAV
MAGVKLVPFGQQAAQQLILRLCDHYAAEMPRALAAPDGDIGSATPLAAIASARHETQYSRLFRS

Sequences:

>Translated_224_residues
MSTAEQRLRLMQLASSNLPVGGYSWSQGLEWAVEAGWVPDVAAFERWQRRQMTEGFFTVDLPLFARLYRACEQGDIAAAQ
RWTAYLLACRETRELREEERNRGAAFARLLIDWQPDCPPPWRTLCQQSQLAGMAWLGVRWRIALPEMALSLGYSWIESAV
MAGVKLVPFGQQAAQQLILRLCDHYAAEMPRALAAPDGDIGSATPLAAIASARHETQYSRLFRS
>Mature_223_residues
STAEQRLRLMQLASSNLPVGGYSWSQGLEWAVEAGWVPDVAAFERWQRRQMTEGFFTVDLPLFARLYRACEQGDIAAAQR
WTAYLLACRETRELREEERNRGAAFARLLIDWQPDCPPPWRTLCQQSQLAGMAWLGVRWRIALPEMALSLGYSWIESAVM
AGVKLVPFGQQAAQQLILRLCDHYAAEMPRALAAPDGDIGSATPLAAIASARHETQYSRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 25246; Mature: 25115

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAEQRLRLMQLASSNLPVGGYSWSQGLEWAVEAGWVPDVAAFERWQRRQMTEGFFTVD
CCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEC
LPLFARLYRACEQGDIAAAQRWTAYLLACRETRELREEERNRGAAFARLLIDWQPDCPPP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
WRTLCQQSQLAGMAWLGVRWRIALPEMALSLGYSWIESAVMAGVKLVPFGQQAAQQLILR
HHHHHHHHHHCCHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHH
LCDHYAAEMPRALAAPDGDIGSATPLAAIASARHETQYSRLFRS
HHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STAEQRLRLMQLASSNLPVGGYSWSQGLEWAVEAGWVPDVAAFERWQRRQMTEGFFTVD
CCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEC
LPLFARLYRACEQGDIAAAQRWTAYLLACRETRELREEERNRGAAFARLLIDWQPDCPPP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
WRTLCQQSQLAGMAWLGVRWRIALPEMALSLGYSWIESAVMAGVKLVPFGQQAAQQLILR
HHHHHHHHHHCCHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHH
LCDHYAAEMPRALAAPDGDIGSATPLAAIASARHETQYSRLFRS
HHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2211515; 1624427 [H]