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The map label for this gene is ureD [H]

Identifier: 238896560

GI number: 238896560

Start: 4539369

End: 4540193

Strand: Direct

Name: ureD [H]

Synonym: KP1_4753

Alternate gene names: 238896560

Gene position: 4539369-4540193 (Clockwise)

Preceding gene: 238896559

Following gene: 238896561

Centisome position: 86.49

GC content: 63.64

Gene sequence:

>825_bases
TTGCACGGTACCGTGTTACCACCACTCAAAAAAGGCTGGCAGGCTACGCTGGATCTCCGCTTTCACCAGGCCGGCGGCAA
GACCGTTCTCGCCAGCGCCCAACACGTCGGCCCGCTGACCGTCCAGCGCCCGCTTTACCCGGAAGAAGAGACCTGTCACC
TCTATCTGCTTCACCCGCCCGGCGGCATCGTCGGCGGTGATGAGCTGACAATTAGCGCGCACCTTGCCCCCGGCTGCCAT
ACGCTGATAACCATGCCTGGCGCCAGCAAGTTTTACCGCAGCAGCGGCGCGCAAGCGCTAGTTCGCCAGCAGTTGACCCT
TGCCCCACAGGCGACCCTGGAGTGGCTCCCGCAGGATGCCATCTTCTTTCCCGGGGCCAATGCCCGGCTGTTCACCATCT
TTCATCTTTGCGCCTCCAGCAGGCTGCTGGCCTGGGATCTGCTCTGCCTTGGCCGCCCGGTGATTGGCGAAACCTTCAGC
CACGGCACCCTCAGCAACCGGCTGGAGGTATGGGTGGACGATGAGCCGCTGCTGGTCGAGCGCCTGCACCTGCAGGAGGG
AGAGCTCTCCAGCATCGCCGAACGTCCCTGGGTCGGCACTTTGCTGTGCTATCCGGCTACCGATGCCCTGCTCGACGGGG
TGCGCGACGCGCTGGCGCCGCTCGGTCTCTACGCCGGCGCCAGCCTGACCGACCGCCTGCTGACGGTGCGTTTCCTCAGT
GACGATAATCTGATTTGCCAGCGGGTGATGCGCGACGTATGGCAGTTTCTGCGCCCTCATCTCACCGGTAAATCTCCCGT
ACTTCCCCGAATCTGGCTGACTTAA

Upstream 100 bases:

>100_bases
CGGGTTACGGATGACATAAGCGTTTCGTATGACCGGGATAAACTCCCGCCGATCAATACTCATTGCTGCTGTTTTATCTT
GATTTTGCAGGGGCGCAACA

Downstream 100 bases:

>100_bases
GAGAACGTTATGGAACTGACCCCCCGAGAAAAAGACAAGCTGTTGCTGTTTACCGCCGCGCTGGTGGCGGAGCGTCGCCT
GGCCCGCGGCCTGAAGCTCA

Product: urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MHGTVLPPLKKGWQATLDLRFHQAGGKTVLASAQHVGPLTVQRPLYPEEETCHLYLLHPPGGIVGGDELTISAHLAPGCH
TLITMPGASKFYRSSGAQALVRQQLTLAPQATLEWLPQDAIFFPGANARLFTIFHLCASSRLLAWDLLCLGRPVIGETFS
HGTLSNRLEVWVDDEPLLVERLHLQEGELSSIAERPWVGTLLCYPATDALLDGVRDALAPLGLYAGASLTDRLLTVRFLS
DDNLICQRVMRDVWQFLRPHLTGKSPVLPRIWLT

Sequences:

>Translated_274_residues
MHGTVLPPLKKGWQATLDLRFHQAGGKTVLASAQHVGPLTVQRPLYPEEETCHLYLLHPPGGIVGGDELTISAHLAPGCH
TLITMPGASKFYRSSGAQALVRQQLTLAPQATLEWLPQDAIFFPGANARLFTIFHLCASSRLLAWDLLCLGRPVIGETFS
HGTLSNRLEVWVDDEPLLVERLHLQEGELSSIAERPWVGTLLCYPATDALLDGVRDALAPLGLYAGASLTDRLLTVRFLS
DDNLICQRVMRDVWQFLRPHLTGKSPVLPRIWLT
>Mature_274_residues
MHGTVLPPLKKGWQATLDLRFHQAGGKTVLASAQHVGPLTVQRPLYPEEETCHLYLLHPPGGIVGGDELTISAHLAPGCH
TLITMPGASKFYRSSGAQALVRQQLTLAPQATLEWLPQDAIFFPGANARLFTIFHLCASSRLLAWDLLCLGRPVIGETFS
HGTLSNRLEVWVDDEPLLVERLHLQEGELSSIAERPWVGTLLCYPATDALLDGVRDALAPLGLYAGASLTDRLLTVRFLS
DDNLICQRVMRDVWQFLRPHLTGKSPVLPRIWLT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 30213; Mature: 30213

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGTVLPPLKKGWQATLDLRFHQAGGKTVLASAQHVGPLTVQRPLYPEEETCHLYLLHPP
CCCCCCCHHHCCCEEEEEEEEECCCCCEEEECCCCCCCEEEECCCCCCCCCEEEEEECCC
GGIVGGDELTISAHLAPGCHTLITMPGASKFYRSSGAQALVRQQLTLAPQATLEWLPQDA
CCEECCCEEEEEEEECCCCEEEEECCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCC
IFFPGANARLFTIFHLCASSRLLAWDLLCLGRPVIGETFSHGTLSNRLEVWVDDEPLLVE
EEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEECCCCCEEH
RLHLQEGELSSIAERPWVGTLLCYPATDALLDGVRDALAPLGLYAGASLTDRLLTVRFLS
HHHCCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEC
DDNLICQRVMRDVWQFLRPHLTGKSPVLPRIWLT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
>Mature Secondary Structure
MHGTVLPPLKKGWQATLDLRFHQAGGKTVLASAQHVGPLTVQRPLYPEEETCHLYLLHPP
CCCCCCCHHHCCCEEEEEEEEECCCCCEEEECCCCCCCEEEECCCCCCCCCEEEEEECCC
GGIVGGDELTISAHLAPGCHTLITMPGASKFYRSSGAQALVRQQLTLAPQATLEWLPQDA
CCEECCCEEEEEEEECCCCEEEEECCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCC
IFFPGANARLFTIFHLCASSRLLAWDLLCLGRPVIGETFSHGTLSNRLEVWVDDEPLLVE
EEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEECCCCCEEH
RLHLQEGELSSIAERPWVGTLLCYPATDALLDGVRDALAPLGLYAGASLTDRLLTVRFLS
HHHCCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEC
DDNLICQRVMRDVWQFLRPHLTGKSPVLPRIWLT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA