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The map label for this gene is ygfA [H]

Identifier: 238896456

GI number: 238896456

Start: 4436113

End: 4436709

Strand: Direct

Name: ygfA [H]

Synonym: KP1_4634

Alternate gene names: 238896456

Gene position: 4436113-4436709 (Clockwise)

Preceding gene: 238896455

Following gene: 238896458

Centisome position: 84.52

GC content: 61.98

Gene sequence:

>597_bases
ATGACTATACAGACCGATACCCTGCTCTCCCGTCAGCATATTCGCCAGCAGATCCGCGATCGTCGACGCGCACTCAGCCC
GGAGCAACAGCGCCTGTTTGCCCAACAGGCCGCCGAGCGGATGATGGCCTGGCCGCCGGTAGTTCTCGCCCACAACGTGG
CGCTGTTTCTCTCCTTTGACGGCGAGCTGGACACTCAGCCGCTGATCGACCAGCTCTGGCGCGCCGGCAAGCGGGTATAT
CTCCCGGTGCTGCATCCCTTTAGCCCCGGCAATCTGCTGTTTTTACACTACCATCCGCAGAGCCAACTGATCGTGAATCG
CCTGAAGATCCGCGAACCGAAGCTCGATGTGCGGGATGTGCTGCCGCTGGCTGAACTCGATGTGCTGGTGACCCCGCTGG
TGGCCTTCGATGTCAGTGGCCAACGGCTGGGAATGGGCGGCGGTTTTTACGACCGGACGCTGCAAAACTGGCAGCAGTAT
CGCCTGCAGCCGGTGGGCTACGCGCACGACTGCCAGCAGGTGGATAGCCTGCCGAGCGAAGAGTGGGATATCCCGCTGCC
GGCGGTCATCACCCCGGGAAAAACCTGGTGTTGGTAG

Upstream 100 bases:

>100_bases
CCCTTCTTTACTTCGCATCATCCCCCATACGTGTTTTCGGCTGAAGCCGCCCTGTATTACACTTGCTCCTATTGTTTCGC
CAGCTCGTAACGAGACCTGC

Downstream 100 bases:

>100_bases
GTACGCGGGGACGAGAAATTCAGCCTGGAAAGTATTAACAAAAAAACGGGCAGGTACGCGACCTGCCCGAGAGGCAAAAA
TGATTAGAACAACAGACGGG

Product: putative ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTIQTDTLLSRQHIRQQIRDRRRALSPEQQRLFAQQAAERMMAWPPVVLAHNVALFLSFDGELDTQPLIDQLWRAGKRVY
LPVLHPFSPGNLLFLHYHPQSQLIVNRLKIREPKLDVRDVLPLAELDVLVTPLVAFDVSGQRLGMGGGFYDRTLQNWQQY
RLQPVGYAHDCQQVDSLPSEEWDIPLPAVITPGKTWCW

Sequences:

>Translated_198_residues
MTIQTDTLLSRQHIRQQIRDRRRALSPEQQRLFAQQAAERMMAWPPVVLAHNVALFLSFDGELDTQPLIDQLWRAGKRVY
LPVLHPFSPGNLLFLHYHPQSQLIVNRLKIREPKLDVRDVLPLAELDVLVTPLVAFDVSGQRLGMGGGFYDRTLQNWQQY
RLQPVGYAHDCQQVDSLPSEEWDIPLPAVITPGKTWCW
>Mature_197_residues
TIQTDTLLSRQHIRQQIRDRRRALSPEQQRLFAQQAAERMMAWPPVVLAHNVALFLSFDGELDTQPLIDQLWRAGKRVYL
PVLHPFSPGNLLFLHYHPQSQLIVNRLKIREPKLDVRDVLPLAELDVLVTPLVAFDVSGQRLGMGGGFYDRTLQNWQQYR
LQPVGYAHDCQQVDSLPSEEWDIPLPAVITPGKTWCW

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=181, Percent_Identity=80.6629834254144, Blast_Score=310, Evalue=3e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 22882; Mature: 22751

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQTDTLLSRQHIRQQIRDRRRALSPEQQRLFAQQAAERMMAWPPVVLAHNVALFLSFD
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEEC
GELDTQPLIDQLWRAGKRVYLPVLHPFSPGNLLFLHYHPQSQLIVNRLKIREPKLDVRDV
CCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHH
LPLAELDVLVTPLVAFDVSGQRLGMGGGFYDRTLQNWQQYRLQPVGYAHDCQQVDSLPSE
CCHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
EWDIPLPAVITPGKTWCW
CCCCCCCCEECCCCCCCC
>Mature Secondary Structure 
TIQTDTLLSRQHIRQQIRDRRRALSPEQQRLFAQQAAERMMAWPPVVLAHNVALFLSFD
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEEC
GELDTQPLIDQLWRAGKRVYLPVLHPFSPGNLLFLHYHPQSQLIVNRLKIREPKLDVRDV
CCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHH
LPLAELDVLVTPLVAFDVSGQRLGMGGGFYDRTLQNWQQYRLQPVGYAHDCQQVDSLPSE
CCHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
EWDIPLPAVITPGKTWCW
CCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]