| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is ygfF [H]
Identifier: 238896447
GI number: 238896447
Start: 4425170
End: 4425913
Strand: Reverse
Name: ygfF [H]
Synonym: KP1_4624
Alternate gene names: 238896447
Gene position: 4425913-4425170 (Counterclockwise)
Preceding gene: 238896448
Following gene: 238896440
Centisome position: 84.33
GC content: 63.17
Gene sequence:
>744_bases ATGGGAATAGCTCTTATTAGCGGCGCGAGCCGCGGCATAGGCCGGGCGACGGCGCTGCTGTTGGCGCAGGAAGGATATAC CGTGGCGGTCAATTACCATCACAACATTAACGCCGCCACCGAGGTGGTGAATACCATTGTGGCGTCTGGCGGCAAAGCCA CGGCGCTGCGGGCGGACATCAGCGATGAAGCGCAGGTGATGGCGATGTTTGAGGCGATCGACCGCATGGGCGAGCCGCTG ACGGCGCTGGTCAACAACGCCGGGATCCTGTTTACCCAGTGTACGGTGGAGAGCCTGAGCGCCGAGCGTATTAACCGCGT GCTGGCCACCAACGTCACCGGTTATTTCCTCTGCTGTCGTGAGGCGGTAAAACGGATGTCGCATCGGCATGGCGGCAAGG GTGGGGCGATAGTTAACGTGTCGTCGGCGGCCTCGCGCCTTGGCGCGCCGGGGGAGTACGTTGACTATGCCGCGTCGAAA GGGGCGGTAGATACCCTGACCACCGGGCTGGCGCTGGAGGTGGCGGCGCAAGGGATCCGGGTCAACGGAGTGCGTCCGGG GCTGATTTATACCGAGATGCACGCCTCCGGCGGTGAACCGGGACGCGTGGATCGAGTGAAAGGTTCGCTACCGATGCAGC GCGGCGGCCAGCCGGAAGAGGTCGCTCAGGCCATTGCCTGGCTGCTGAGCGACAAAGCGTCGTATGTGACGGGTAGCTTC CTTGAACTGGCGGGCGGGAAATAA
Upstream 100 bases:
>100_bases TGTTCTGCTCCTGCGTGCCGATGAGCGAATACCAGTAAGTTTGCGTTTTAGCTAAACTTTTAAAGGCGCTGCGGCGCCTT TATTTTTTTGGAGGGAAGGT
Downstream 100 bases:
>100_bases CCCGTAGATGTCTATTGCCCGGCGGCGCTGCGCTTGCCGGGCCTACGGGGTCAAAGCCGAATGGTAGGCCGGGTAAGGCG TAGCCGCCACCCGGCATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MGIALISGASRGIGRATALLLAQEGYTVAVNYHHNINAATEVVNTIVASGGKATALRADISDEAQVMAMFEAIDRMGEPL TALVNNAGILFTQCTVESLSAERINRVLATNVTGYFLCCREAVKRMSHRHGGKGGAIVNVSSAASRLGAPGEYVDYAASK GAVDTLTTGLALEVAAQGIRVNGVRPGLIYTEMHASGGEPGRVDRVKGSLPMQRGGQPEEVAQAIAWLLSDKASYVTGSF LELAGGK
Sequences:
>Translated_247_residues MGIALISGASRGIGRATALLLAQEGYTVAVNYHHNINAATEVVNTIVASGGKATALRADISDEAQVMAMFEAIDRMGEPL TALVNNAGILFTQCTVESLSAERINRVLATNVTGYFLCCREAVKRMSHRHGGKGGAIVNVSSAASRLGAPGEYVDYAASK GAVDTLTTGLALEVAAQGIRVNGVRPGLIYTEMHASGGEPGRVDRVKGSLPMQRGGQPEEVAQAIAWLLSDKASYVTGSF LELAGGK >Mature_246_residues GIALISGASRGIGRATALLLAQEGYTVAVNYHHNINAATEVVNTIVASGGKATALRADISDEAQVMAMFEAIDRMGEPLT ALVNNAGILFTQCTVESLSAERINRVLATNVTGYFLCCREAVKRMSHRHGGKGGAIVNVSSAASRLGAPGEYVDYAASKG AVDTLTTGLALEVAAQGIRVNGVRPGLIYTEMHASGGEPGRVDRVKGSLPMQRGGQPEEVAQAIAWLLSDKASYVTGSFL ELAGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=35.2459016393443, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=34.3873517786561, Blast_Score=113, Evalue=1e-25, Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=31.9066147859922, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=30.8943089430894, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=30.2040816326531, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI109715829, Length=247, Percent_Identity=29.5546558704453, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=30.5220883534137, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI59889578, Length=201, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=29.0322580645161, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=30.6201550387597, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI31542939, Length=257, Percent_Identity=28.0155642023346, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI209862901, Length=201, Percent_Identity=29.8507462686567, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI19923983, Length=201, Percent_Identity=29.8507462686567, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI4503301, Length=202, Percent_Identity=29.2079207920792, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=81.7813765182186, Blast_Score=418, Evalue=1e-118, Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=31.8367346938775, Blast_Score=127, Evalue=7e-31, Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=34.6774193548387, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=33.1967213114754, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=33.0612244897959, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786812, Length=257, Percent_Identity=31.9066147859922, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=32.9218106995885, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=33.6065573770492, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=30.2325581395349, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=28.8617886178862, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=28.8617886178862, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787891, Length=244, Percent_Identity=27.0491803278689, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71994604, Length=259, Percent_Identity=33.5907335907336, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71994600, Length=264, Percent_Identity=32.5757575757576, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI115534694, Length=250, Percent_Identity=33.6, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=33.6065573770492, Blast_Score=107, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=34.2741935483871, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=32.3076923076923, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=33.201581027668, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17536651, Length=250, Percent_Identity=31.6, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=33.0769230769231, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17563726, Length=255, Percent_Identity=30.5882352941176, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=29.3233082706767, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=31.0344827586207, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=30.6513409961686, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17561272, Length=244, Percent_Identity=29.0983606557377, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=31.1538461538462, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI72000259, Length=257, Percent_Identity=30.3501945525292, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=31.5384615384615, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17565030, Length=257, Percent_Identity=28.7937743190661, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=28.968253968254, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=29.0697674418605, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=28.1746031746032, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=29.6875, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560150, Length=256, Percent_Identity=28.515625, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17538182, Length=259, Percent_Identity=29.3436293436293, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=31.8181818181818, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=28.735632183908, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=28.030303030303, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=29.811320754717, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI72001658, Length=220, Percent_Identity=30, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=29.5336787564767, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17508895, Length=207, Percent_Identity=27.536231884058, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17508651, Length=260, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=252, Percent_Identity=28.1746031746032, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323882, Length=244, Percent_Identity=30.327868852459, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=36.6533864541833, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=37.2549019607843, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI23397609, Length=257, Percent_Identity=36.5758754863813, Blast_Score=120, Evalue=7e-28, Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=36.6533864541833, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=34.6938775510204, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=31.7073170731707, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI24644337, Length=174, Percent_Identity=37.9310344827586, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI17737361, Length=236, Percent_Identity=32.2033898305085, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641232, Length=233, Percent_Identity=30.0429184549356, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI281364494, Length=146, Percent_Identity=31.5068493150685, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI28571387, Length=236, Percent_Identity=28.8135593220339, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24648693, Length=232, Percent_Identity=28.0172413793103, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI21355889, Length=232, Percent_Identity=28.0172413793103, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI18859837, Length=264, Percent_Identity=27.6515151515151, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI21357673, Length=252, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25661; Mature: 25529
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIALISGASRGIGRATALLLAQEGYTVAVNYHHNINAATEVVNTIVASGGKATALRADI CCEEEECCCCCCCHHHHHEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCC SDEAQVMAMFEAIDRMGEPLTALVNNAGILFTQCTVESLSAERINRVLATNVTGYFLCCR CCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHH EAVKRMSHRHGGKGGAIVNVSSAASRLGAPGEYVDYAASKGAVDTLTTGLALEVAAQGIR HHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCEE VNGVRPGLIYTEMHASGGEPGRVDRVKGSLPMQRGGQPEEVAQAIAWLLSDKASYVTGSF ECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHH LELAGGK HHCCCCC >Mature Secondary Structure GIALISGASRGIGRATALLLAQEGYTVAVNYHHNINAATEVVNTIVASGGKATALRADI CEEEECCCCCCCHHHHHEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCC SDEAQVMAMFEAIDRMGEPLTALVNNAGILFTQCTVESLSAERINRVLATNVTGYFLCCR CCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHH EAVKRMSHRHGGKGGAIVNVSSAASRLGAPGEYVDYAASKGAVDTLTTGLALEVAAQGIR HHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCEE VNGVRPGLIYTEMHASGGEPGRVDRVKGSLPMQRGGQPEEVAQAIAWLLSDKASYVTGSF ECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHH LELAGGK HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 7764507 [H]