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The map label for this gene is ycgG [C]

Identifier: 238896406

GI number: 238896406

Start: 4387352

End: 4388593

Strand: Direct

Name: ycgG [C]

Synonym: KP1_4578

Alternate gene names: 238896406

Gene position: 4387352-4388593 (Clockwise)

Preceding gene: 238896405

Following gene: 238896409

Centisome position: 83.59

GC content: 60.39

Gene sequence:

>1242_bases
ATGCTCACCACGCTGCGCCAGGCGGCAAGGCTACTCGACGAGGCCTTGCCGCCGTTACCGATGTTGATTCTGAGCCGCAG
CCCGGCCATCTGGCTGTGGCAAACGCTGCTCTATCAGGTGAGTCATCCGGATCGTCTGCGCAACGTCCATACAGCCCCCG
CCGATCTGTCCTGCGCGGAGCTGGCCCATCGACTGGAGAATGCGCCGCGGCTTGAGCGGCTTGCCGGCGAAGCCGCCCTG
ATCCACGGAAAACGGGTCGCCGGGTTGACCCACGCCGAGCTCAAGGTGATCCTCGCCCTGCTGCAAGGGCAGACGATAGG
CGAGCAGGCCCAACGTCTCGGATTGAGCCAGAAAACGCTCTACACCCAGCGGCTGGCTGGGGTGAAAAAGCTGGTGGAAT
GTCATCCGCATCTGGCCCCCCGCTTTCCGCGCACGCTGCTGCCGCGCTCACCCGCAAACGCACTGACGGCGTTTGAACAG
GAATGGGTACAAGCGATTCACGATCGCCAGGTCTTCCCGGTTTTTCAACCTATCGTCGATAGTCGCTCACAGCTACAGGG
GGTGGAGATCCTGATCCGCTGGCGCCACCGCGGCCAGGTACTTCACCCCCAGACCTTTCTGCCGCACTTCCGCGCCGACT
ACACCTGGCTGCTGCTTACGGCCTTTGTTCTGCAGGAGGCCGTGCAGAATATTAATGAGTATCCAGGCGCCTTCTATTTT
TCGGTCAACATACCCTCCTCGCTCGCCGACAGTGACAGCCTGCTGCGGATGGTGGAAGCCGCTCGCCAGCAGCTTCGGCA
GCCAGAGGGCGTGACAAGGCTGGTGCTGGAATATGCTGAAACTATCGATTTTCGCCATCAGAGCCGCTCCGCCGCCCACG
TGGCGCAGCTGCAACGTGCTGGCGTGCGCGTGATGCTGGACGACTGCTTTTCTCAGGGGAGCGTTATCTTTCCGGCGCGT
CGACTGCACTTCAATGCGTATAAACTGGATATGAGCATCGTCAACGACGCCCAGCACGATCCAAAGGCGCTTGCGCTAAT
AAAAAGCCTGGCCTACTACTGCCAGTTAAGCGACAGTCGCTGTGTGGCGGAAGGGGTGGATTCACTGGCGAAATTTACGC
AGTTAAAATCGCTGGGGATTGATCGCTTCCAGGGCTATCTGTTTTCACCACCGATGCGGCGCGAACATCTCCCGGATCTG
ATCCGCCGCTTTTCCCACCAGCGCGATCCGGCGGATCGTTGA

Upstream 100 bases:

>100_bases
CGCGAAGCGGCCCGTTGAGCTGCCGGTCGAGGGCGTGTCCCTGCGCGAGCTGGCCGCCGTGAAGCGGATCGTGGTGTATC
TCCCTGACGATCCCCTGTGG

Downstream 100 bases:

>100_bases
GGGTGCGAGAAAAGCGCACCGGTTAGCACCGGTGCCGGTACGTCATGCGCGAATATCGTCGTATTCGCGGGTGTTATCGA
ATTCATGTTTGGCAAACGGG

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MLTTLRQAARLLDEALPPLPMLILSRSPAIWLWQTLLYQVSHPDRLRNVHTAPADLSCAELAHRLENAPRLERLAGEAAL
IHGKRVAGLTHAELKVILALLQGQTIGEQAQRLGLSQKTLYTQRLAGVKKLVECHPHLAPRFPRTLLPRSPANALTAFEQ
EWVQAIHDRQVFPVFQPIVDSRSQLQGVEILIRWRHRGQVLHPQTFLPHFRADYTWLLLTAFVLQEAVQNINEYPGAFYF
SVNIPSSLADSDSLLRMVEAARQQLRQPEGVTRLVLEYAETIDFRHQSRSAAHVAQLQRAGVRVMLDDCFSQGSVIFPAR
RLHFNAYKLDMSIVNDAQHDPKALALIKSLAYYCQLSDSRCVAEGVDSLAKFTQLKSLGIDRFQGYLFSPPMRREHLPDL
IRRFSHQRDPADR

Sequences:

>Translated_413_residues
MLTTLRQAARLLDEALPPLPMLILSRSPAIWLWQTLLYQVSHPDRLRNVHTAPADLSCAELAHRLENAPRLERLAGEAAL
IHGKRVAGLTHAELKVILALLQGQTIGEQAQRLGLSQKTLYTQRLAGVKKLVECHPHLAPRFPRTLLPRSPANALTAFEQ
EWVQAIHDRQVFPVFQPIVDSRSQLQGVEILIRWRHRGQVLHPQTFLPHFRADYTWLLLTAFVLQEAVQNINEYPGAFYF
SVNIPSSLADSDSLLRMVEAARQQLRQPEGVTRLVLEYAETIDFRHQSRSAAHVAQLQRAGVRVMLDDCFSQGSVIFPAR
RLHFNAYKLDMSIVNDAQHDPKALALIKSLAYYCQLSDSRCVAEGVDSLAKFTQLKSLGIDRFQGYLFSPPMRREHLPDL
IRRFSHQRDPADR
>Mature_413_residues
MLTTLRQAARLLDEALPPLPMLILSRSPAIWLWQTLLYQVSHPDRLRNVHTAPADLSCAELAHRLENAPRLERLAGEAAL
IHGKRVAGLTHAELKVILALLQGQTIGEQAQRLGLSQKTLYTQRLAGVKKLVECHPHLAPRFPRTLLPRSPANALTAFEQ
EWVQAIHDRQVFPVFQPIVDSRSQLQGVEILIRWRHRGQVLHPQTFLPHFRADYTWLLLTAFVLQEAVQNINEYPGAFYF
SVNIPSSLADSDSLLRMVEAARQQLRQPEGVTRLVLEYAETIDFRHQSRSAAHVAQLQRAGVRVMLDDCFSQGSVIFPAR
RLHFNAYKLDMSIVNDAQHDPKALALIKSLAYYCQLSDSRCVAEGVDSLAKFTQLKSLGIDRFQGYLFSPPMRREHLPDL
IRRFSHQRDPADR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=244, Percent_Identity=24.5901639344262, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787541, Length=245, Percent_Identity=23.265306122449, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788502, Length=258, Percent_Identity=23.6434108527132, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI87081980, Length=243, Percent_Identity=25.1028806584362, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790496, Length=235, Percent_Identity=22.1276595744681, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081921, Length=244, Percent_Identity=26.2295081967213, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 46958; Mature: 46958

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTLRQAARLLDEALPPLPMLILSRSPAIWLWQTLLYQVSHPDRLRNVHTAPADLSCAE
CCCHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHH
LAHRLENAPRLERLAGEAALIHGKRVAGLTHAELKVILALLQGQTIGEQAQRLGLSQKTL
HHHHHHCCHHHHHHCCCHHHCCCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH
YTQRLAGVKKLVECHPHLAPRFPRTLLPRSPANALTAFEQEWVQAIHDRQVFPVFQPIVD
HHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
SRSQLQGVEILIRWRHRGQVLHPQTFLPHFRADYTWLLLTAFVLQEAVQNINEYPGAFYF
CHHHHHHHHHHHHHHHCCCEECCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
SVNIPSSLADSDSLLRMVEAARQQLRQPEGVTRLVLEYAETIDFRHQSRSAAHVAQLQRA
EEECCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVRVMLDDCFSQGSVIFPARRLHFNAYKLDMSIVNDAQHDPKALALIKSLAYYCQLSDSR
CCCEEHHHHHCCCCEEECHHHHCCCHHEEHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCH
CVAEGVDSLAKFTQLKSLGIDRFQGYLFSPPMRREHLPDLIRRFSHQRDPADR
HHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLTTLRQAARLLDEALPPLPMLILSRSPAIWLWQTLLYQVSHPDRLRNVHTAPADLSCAE
CCCHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHH
LAHRLENAPRLERLAGEAALIHGKRVAGLTHAELKVILALLQGQTIGEQAQRLGLSQKTL
HHHHHHCCHHHHHHCCCHHHCCCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH
YTQRLAGVKKLVECHPHLAPRFPRTLLPRSPANALTAFEQEWVQAIHDRQVFPVFQPIVD
HHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
SRSQLQGVEILIRWRHRGQVLHPQTFLPHFRADYTWLLLTAFVLQEAVQNINEYPGAFYF
CHHHHHHHHHHHHHHHCCCEECCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
SVNIPSSLADSDSLLRMVEAARQQLRQPEGVTRLVLEYAETIDFRHQSRSAAHVAQLQRA
EEECCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVRVMLDDCFSQGSVIFPARRLHFNAYKLDMSIVNDAQHDPKALALIKSLAYYCQLSDSR
CCCEEHHHHHCCCCEEECHHHHCCCHHEEHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCH
CVAEGVDSLAKFTQLKSLGIDRFQGYLFSPPMRREHLPDLIRRFSHQRDPADR
HHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]