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The map label for this gene is pduJ [H]

Identifier: 238896316

GI number: 238896316

Start: 4294023

End: 4294298

Strand: Direct

Name: pduJ [H]

Synonym: KP1_4478

Alternate gene names: 238896316

Gene position: 4294023-4294298 (Clockwise)

Preceding gene: 238896315

Following gene: 238896317

Centisome position: 81.81

GC content: 59.06

Gene sequence:

>276_bases
ATGAATAACGCACTAGGACTGGTTGAAACGAAAGGCCTGGTTGGCGCCATTGAAGCCGCTGATGCAATGGTGAAATCCGC
CAACGTGCAGTTGATTGGTTACGAAAAAATTGGCTCCGGGCTGATTACCGTGATGGTCCGCGGAGACGTCGGCGCGGTCA
AAGCCGCCGTTGACGCCGGCAGCGCGGCGGCCAGCGTGGTCGGCGAGGTCAAGTCCAGCCATGTGATCCCGCGCCCGCAT
AGCGATGTTGAGGCCATTCTGCCGAAATCCGTCTGA

Upstream 100 bases:

>100_bases
GAACAGGCTGGCCCGGCGAAACACTGGCAACAATGCGGCTCGTCTCGTCAAAGGGATCCCATTTCGGGATCGCCATGCTT
AATCCACAGGAGAACGCAGT

Downstream 100 bases:

>100_bases
CCCTCAAAAAAGGAGCACCGCGTGAAGCAATCACTGGGATTACTTGAGGTCAGCGGTCTGGCCCTGGCCATCACCTGCGC
CGACGCTATGGCGAAAGCGG

Product: putative propanediol utilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASVVGEVKSSHVIPRPH
SDVEAILPKSV

Sequences:

>Translated_91_residues
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASVVGEVKSSHVIPRPH
SDVEAILPKSV
>Mature_91_residues
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASVVGEVKSSHVIPRPH
SDVEAILPKSV

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=86, Percent_Identity=62.7906976744186, Blast_Score=97, Evalue=2e-22,
Organism=Escherichia coli, GI87082105, Length=86, Percent_Identity=50, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9108; Mature: 9108

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAG
CCCCCCEEECCCCEEHHHHHHHHHHCCCEEEEEHHHCCCCEEEEEEECCCCCEEHHHCCC
SAAASVVGEVKSSHVIPRPHSDVEAILPKSV
CHHHHHHHHHHCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAG
CCCCCCEEECCCCEEHHHHHHHHHHCCCEEEEEHHHCCCCEEEEEEECCCCCEEHHHCCC
SAAASVVGEVKSSHVIPRPHSDVEAILPKSV
CHHHHHHHHHHCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]