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The map label for this gene is cbiM [H]

Identifier: 238896292

GI number: 238896292

Start: 4273971

End: 4274708

Strand: Reverse

Name: cbiM [H]

Synonym: KP1_4453

Alternate gene names: 238896292

Gene position: 4274708-4273971 (Counterclockwise)

Preceding gene: 238896293

Following gene: 238896291

Centisome position: 81.45

GC content: 62.33

Gene sequence:

>738_bases
ATGAATCAGGTGAAATCGCTGAAGCAGCTTTCGTATGGGGGGCTGGCGGCCGCTGTTCTGCTGATCATCGTCCCGCAGGA
GGCGTTCGCCATGCATATCATGGAGGGCTTTTTGCCGCCGATGTGGGCGCTGGCGTGGTGGCTGCTGTTTTTACCCTGCC
TGTGGTACGGCCTGGTGCGCCTGCGGCGTATCGTTCAGGAAGAGAGCAATCAGAAGGTGCTGCTGGCCCTCTGCGGGGCG
TTTATTTTTGTTCTTTCGGCGCTGAAGATCCCGTCGGTGACCGGCAGCTGCTCGCATCCGACCGGCGTCGGTCTGGCGGT
GATCCTCTTCGGGCCGGGCGTGGTGGCGGTGCTGGGGGCGATCGTTCTGCTGTTCCAGGCGCTGCTGCTGGCGCATGGCG
GCCTGACCACCCTTGGCGCCAACGGGATGTCGATGGCGGTGATCGGCCCGATGGTCGGCTATCTGGTGTGGAAGCTGGCC
TGTCGGGCGGGGATCCGTCGCGATGTCGGGGTCTTTCTCTGCGCCATGCTGGCGGATCTGATGACCTACTTTGTCACCTC
CGTCCAGCTCGGGGTGGCCTTTCCCGATCCGGCAACCGGGGCAGGTGGATCGATCGCCAAGTTTATGGGCATCTTCTGCC
TGACGCAGATCCCGATAGCCATCGCGGAAGGCTTGCTCACCGTGATGATCTACGATCAGCTAACCAAACGGCGACTGATC
GCCGCGGAGGCACATTAA

Upstream 100 bases:

>100_bases
CGGGCGAGCAGTGCTGGCGCCGTCTGCGCGAGGTCAGCGATGACCAGCCGCTGCCCTATTTCTCGACCATCCTGGTTAAC
AAACAATGGGAGGAGGCGTA

Downstream 100 bases:

>100_bases
TATGAAAAAGACCCTGATCCTGTTGGCGATGGTGGCCGCCCTGATGATCCTGCCATTTTTTATTAACCACGGCGGCGAGT
TTGGCGGCTCGGACGGCGAA

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNQVKSLKQLSYGGLAAAVLLIIVPQEAFAMHIMEGFLPPMWALAWWLLFLPCLWYGLVRLRRIVQEESNQKVLLALCGA
FIFVLSALKIPSVTGSCSHPTGVGLAVILFGPGVVAVLGAIVLLFQALLLAHGGLTTLGANGMSMAVIGPMVGYLVWKLA
CRAGIRRDVGVFLCAMLADLMTYFVTSVQLGVAFPDPATGAGGSIAKFMGIFCLTQIPIAIAEGLLTVMIYDQLTKRRLI
AAEAH

Sequences:

>Translated_245_residues
MNQVKSLKQLSYGGLAAAVLLIIVPQEAFAMHIMEGFLPPMWALAWWLLFLPCLWYGLVRLRRIVQEESNQKVLLALCGA
FIFVLSALKIPSVTGSCSHPTGVGLAVILFGPGVVAVLGAIVLLFQALLLAHGGLTTLGANGMSMAVIGPMVGYLVWKLA
CRAGIRRDVGVFLCAMLADLMTYFVTSVQLGVAFPDPATGAGGSIAKFMGIFCLTQIPIAIAEGLLTVMIYDQLTKRRLI
AAEAH
>Mature_245_residues
MNQVKSLKQLSYGGLAAAVLLIIVPQEAFAMHIMEGFLPPMWALAWWLLFLPCLWYGLVRLRRIVQEESNQKVLLALCGA
FIFVLSALKIPSVTGSCSHPTGVGLAVILFGPGVVAVLGAIVLLFQALLLAHGGLTTLGANGMSMAVIGPMVGYLVWKLA
CRAGIRRDVGVFLCAMLADLMTYFVTSVQLGVAFPDPATGAGGSIAKFMGIFCLTQIPIAIAEGLLTVMIYDQLTKRRLI
AAEAH

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 26145; Mature: 26145

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCC
>Mature Secondary Structure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HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]