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The map label for this gene is fucU [H]

Identifier: 238896276

GI number: 238896276

Start: 4260307

End: 4260729

Strand: Direct

Name: fucU [H]

Synonym: KP1_4435

Alternate gene names: 238896276

Gene position: 4260307-4260729 (Clockwise)

Preceding gene: 238896275

Following gene: 238896277

Centisome position: 81.17

GC content: 57.21

Gene sequence:

>423_bases
ATGCTCAAAACCATTTCCCCGCTTATATCGCCGGAACTACTGAAAGTGCTGGCCGAAATGGGCCATGGGGATGAAATCAT
TTTTTCCGATGCCCATTTCCCGGCGCACAGCATGGGGCCGCAGGTGATCCGAGCCGATGGCCTGCGAGTCAGCGATCTGC
TGCAGGCGATTATCCCGCTGTTCGAATTAGACAGCTATGCGCCGCCGGTGGTGATGATGGCCGCCGTCGAAGGCGATGCG
CTCGACCCGACGGTGGAACAGCGCTATCGGCAGGCGCTATCGGCGCAGGCCCCCTGCCCGGATATCGTGCGGATTGACCG
CTTTGCCTTCTACGACCGGGCGCAAAAAGCCTTTGCGATCGTTATCACAGGAGAGTGCGCTAAGTACGGAAATATCCTTT
TAAAAAAAGGAGTCACGCCGTAA

Upstream 100 bases:

>100_bases
GGCGAGTTCTCTTCGCCAGAACAGGCCAGAGCGCAGGTCGCGTACCGCTACCGCTATTTCTGGCCGCAAACTGAACCTGA
ACTGATAGAGGAAGCCTGAG

Downstream 100 bases:

>100_bases
TCTCATGCCGGAGCGTCTGCCTGATGCAGACGCTCAATCAATGATGGGATGAGAATAAATGAAAGCAGCCCGCCAGCAGG
CGATCGTCGATCTCCTGATC

Product: fucose operon protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPLFELDSYAPPVVMMAAVEGDA
LDPTVEQRYRQALSAQAPCPDIVRIDRFAFYDRAQKAFAIVITGECAKYGNILLKKGVTP

Sequences:

>Translated_140_residues
MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPLFELDSYAPPVVMMAAVEGDA
LDPTVEQRYRQALSAQAPCPDIVRIDRFAFYDRAQKAFAIVITGECAKYGNILLKKGVTP
>Mature_140_residues
MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPLFELDSYAPPVVMMAAVEGDA
LDPTVEQRYRQALSAQAPCPDIVRIDRFAFYDRAQKAFAIVITGECAKYGNILLKKGVTP

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=144, Percent_Identity=47.2222222222222, Blast_Score=123, Evalue=6e-29,
Organism=Homo sapiens, GI148596951, Length=130, Percent_Identity=45.3846153846154, Blast_Score=103, Evalue=6e-23,
Organism=Escherichia coli, GI1789169, Length=140, Percent_Identity=92.1428571428571, Blast_Score=264, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15308; Mature: 15308

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPL
CCCCCCHHCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
FELDSYAPPVVMMAAVEGDALDPTVEQRYRQALSAQAPCPDIVRIDRFAFYDRAQKAFAI
HHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEE
VITGECAKYGNILLKKGVTP
EEECCCHHHCCCHHHCCCCC
>Mature Secondary Structure
MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPL
CCCCCCHHCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
FELDSYAPPVVMMAAVEGDALDPTVEQRYRQALSAQAPCPDIVRIDRFAFYDRAQKAFAI
HHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEE
VITGECAKYGNILLKKGVTP
EEECCCHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA