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The map label for this gene is ygbE [H]

Identifier: 238896229

GI number: 238896229

Start: 4200991

End: 4201317

Strand: Reverse

Name: ygbE [H]

Synonym: KP1_4381

Alternate gene names: 238896229

Gene position: 4201317-4200991 (Counterclockwise)

Preceding gene: 238896230

Following gene: 238896228

Centisome position: 80.05

GC content: 55.05

Gene sequence:

>327_bases
ATGCGCAATACCCAGAACCTCAGTATTATTCGTTCAGAACCGCCTCCGGCGATCGGCGACGAGACCACCTGGTCTTTGTC
GGGCGCTGCCGTGGGCTTTATTTCGTGGCTGCTGGCGCTGGGTATTCCCTTCCTTCTCTATGGCAGTAATACACTCTTTT
TTCTCCTCTACACCTGGCCATTCTTCCTTGCGTTGATGCCGGTGGCGGTGGTGGTCGGTATTGCGCTGCACTCTCTGCTC
AATGGCAAACTGCTCTATAGCGTCAGCGCGACCATCCTGACCGTTGGGCTGATGTTTGCGCTACTCTTCCTCTGGCTGTT
GGGATAA

Upstream 100 bases:

>100_bases
TGCACCAACTATTAGACCTGCTGCAACAGAGCGATATTATCAGATCCTGAAACGGCAGCGGCATCGAGGGGTGCCGGTTG
CCCGGTCTACAGGATTCGAT

Downstream 100 bases:

>100_bases
CCCGTTGCTGGTATGAATCAAGCATGGGTATCGACAGCAAAAATATGGTACAGTCCCCGCGTTACGCGGCATCGTCCGCG
CGCCCCGGTAGCGTACCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MRNTQNLSIIRSEPPPAIGDETTWSLSGAAVGFISWLLALGIPFLLYGSNTLFFLLYTWPFFLALMPVAVVVGIALHSLL
NGKLLYSVSATILTVGLMFALLFLWLLG

Sequences:

>Translated_108_residues
MRNTQNLSIIRSEPPPAIGDETTWSLSGAAVGFISWLLALGIPFLLYGSNTLFFLLYTWPFFLALMPVAVVVGIALHSLL
NGKLLYSVSATILTVGLMFALLFLWLLG
>Mature_108_residues
MRNTQNLSIIRSEPPPAIGDETTWSLSGAAVGFISWLLALGIPFLLYGSNTLFFLLYTWPFFLALMPVAVVVGIALHSLL
NGKLLYSVSATILTVGLMFALLFLWLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789106, Length=108, Percent_Identity=65.7407407407407, Blast_Score=144, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022721 [H]

Pfam domain/function: PF12084 DUF3561 [H]

EC number: NA

Molecular weight: Translated: 11788; Mature: 11788

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNTQNLSIIRSEPPPAIGDETTWSLSGAAVGFISWLLALGIPFLLYGSNTLFFLLYTWP
CCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHH
FFLALMPVAVVVGIALHSLLNGKLLYSVSATILTVGLMFALLFLWLLG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRNTQNLSIIRSEPPPAIGDETTWSLSGAAVGFISWLLALGIPFLLYGSNTLFFLLYTWP
CCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHH
FFLALMPVAVVVGIALHSLLNGKLLYSVSATILTVGLMFALLFLWLLG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 1316900; 7567469 [H]