| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is pcbC [H]
Identifier: 238896096
GI number: 238896096
Start: 4067006
End: 4068073
Strand: Direct
Name: pcbC [H]
Synonym: KP1_4235
Alternate gene names: 238896096
Gene position: 4067006-4068073 (Clockwise)
Preceding gene: 238896095
Following gene: 238896097
Centisome position: 77.49
GC content: 61.24
Gene sequence:
>1068_bases ATGACCGCCGTGAAGCACGCTTTTACTGAACTCCCGACCATTGATATCCGCGATCTGGCCGGCGATGACCTCGCCAGGCG TCAGGCGGTGGCCGACGCCATCGGCCGCGCGGCGCGCGAGGTGGGCTTTTTCTACATCACCGGCCACGGCATCGACCCGG CGCTGATCGCCGGCGTCCGCGAGGCGGCGAAGCAGATCTTCGCCCTGCCGATGGAGGAGAAGATGAACTATTACATCGGC CACTCCAAAAGCCATAAGGGCTACGTTCCGGAAGGAGAAGAGATCTACGGCTCCGGCAAGCCGGACCATAAAGAGGCTTT CGATATCGGCTTCCAGGCAGCGGATGACCATCCGCTGGTGCTCGCCGGTACGCCGCTGATCGGCGCCAACGAGTGGCCCG ATCTGCCGGATTTCCGCGCGCGGGTGCTGGCCTACTACGACGCGGTTTTCGCCCTCGGCCACCGTCTGTTCGACGCTTTC GCCCTCGCGCTCGGCCTGCCGGAAGGGTATTTCAAACCGATGGTGACCTGCCCGCCGGCTAAGCTGCGGCTGATCCATTA CCCGTTCGACGCCAGCGTCGAAGATGTTCCCGGAATTGGTGCACACACCGACTATGAGTGCTTCACCCTGCTGCTCGCCG ACCAGCCCGGCCTTGAAGTTCTCAATGAAGAAAGCGTGTGGATCGATGCACCTCCCGTCAAGAACGCCGCCGGAGAAGAG GCGTTCGTGATCAATATCGGCGACATGCTGGAAGTGCTCAGCGCCGGCACATTTGTTGCTACAGCCCACCGGGTGCGCAA AGTGCCGCAGGAGCGGTACTCCTTCCCGCTGTTTTTCGCCTGCGATTACCACACGCTGATCCGTCCGCTGCCGACTTTTC TCGCCGCCGGCGAAGCCGGTGAATATCAGGAGCTCAGCATCGGAGAGCATATGTGGAGCCAGGCCCTGCAAACCTATCGC TACCTGCGCGAAAAGGTCAATCGCGGTGAACTTCAGCTACCGGAGCGCGCGCGCGGCACCAATACGTTTGGCCATTTGAA AAAACAGGCACAGCAAAAAACCCCCTAA
Upstream 100 bases:
>100_bases TTCCGGTGGCCGATCTCTGGTCGCTCAACGCCTGGATGGCCGCGCGCCAGCAGGCCCACTTTCAGCAGTTTTTATCGCTC ACTGAACAGGAACCGCAGCC
Downstream 100 bases:
>100_bases CCACCCGTGAGGATCCATGATGACTAGCACCCTGAAAATAATCTCGCGCCGTGTCGCGCTTACCCTTGCCGTCAGCGCCT GTTTTTCCCCTGTCACCCAG
Product: putative oxidoreductase
Products: NA
Alternate protein names: IPNS [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTAVKHAFTELPTIDIRDLAGDDLARRQAVADAIGRAAREVGFFYITGHGIDPALIAGVREAAKQIFALPMEEKMNYYIG HSKSHKGYVPEGEEIYGSGKPDHKEAFDIGFQAADDHPLVLAGTPLIGANEWPDLPDFRARVLAYYDAVFALGHRLFDAF ALALGLPEGYFKPMVTCPPAKLRLIHYPFDASVEDVPGIGAHTDYECFTLLLADQPGLEVLNEESVWIDAPPVKNAAGEE AFVINIGDMLEVLSAGTFVATAHRVRKVPQERYSFPLFFACDYHTLIRPLPTFLAAGEAGEYQELSIGEHMWSQALQTYR YLREKVNRGELQLPERARGTNTFGHLKKQAQQKTP
Sequences:
>Translated_355_residues MTAVKHAFTELPTIDIRDLAGDDLARRQAVADAIGRAAREVGFFYITGHGIDPALIAGVREAAKQIFALPMEEKMNYYIG HSKSHKGYVPEGEEIYGSGKPDHKEAFDIGFQAADDHPLVLAGTPLIGANEWPDLPDFRARVLAYYDAVFALGHRLFDAF ALALGLPEGYFKPMVTCPPAKLRLIHYPFDASVEDVPGIGAHTDYECFTLLLADQPGLEVLNEESVWIDAPPVKNAAGEE AFVINIGDMLEVLSAGTFVATAHRVRKVPQERYSFPLFFACDYHTLIRPLPTFLAAGEAGEYQELSIGEHMWSQALQTYR YLREKVNRGELQLPERARGTNTFGHLKKQAQQKTP >Mature_354_residues TAVKHAFTELPTIDIRDLAGDDLARRQAVADAIGRAAREVGFFYITGHGIDPALIAGVREAAKQIFALPMEEKMNYYIGH SKSHKGYVPEGEEIYGSGKPDHKEAFDIGFQAADDHPLVLAGTPLIGANEWPDLPDFRARVLAYYDAVFALGHRLFDAFA LALGLPEGYFKPMVTCPPAKLRLIHYPFDASVEDVPGIGAHTDYECFTLLLADQPGLEVLNEESVWIDAPPVKNAAGEEA FVINIGDMLEVLSAGTFVATAHRVRKVPQERYSFPLFFACDYHTLIRPLPTFLAAGEAGEYQELSIGEHMWSQALQTYRY LREKVNRGELQLPERARGTNTFGHLKKQAQQKTP
Specific function: Removes, in the presence of oxygen, 4 hydrogen atoms from delta-L-(alpha-aminoadipyl)-L-cysteinyl-D-valine (ACV) to form the azetidinone and thiazolidine rings of isopenicillin [H]
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002057 - InterPro: IPR002283 - InterPro: IPR005123 [H]
Pfam domain/function: PF03171 2OG-FeII_Oxy [H]
EC number: =1.21.3.1 [H]
Molecular weight: Translated: 39358; Mature: 39227
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVKHAFTELPTIDIRDLAGDDLARRQAVADAIGRAAREVGFFYITGHGIDPALIAGVR CCHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHH EAAKQIFALPMEEKMNYYIGHSKSHKGYVPEGEEIYGSGKPDHKEAFDIGFQAADDHPLV HHHHHHHCCCHHHHCCEEECCCCCCCCCCCCCHHCCCCCCCCCHHHHHCCCCCCCCCCEE LAGTPLIGANEWPDLPDFRARVLAYYDAVFALGHRLFDAFALALGLPEGYFKPMVTCPPA EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEECCCC KLRLIHYPFDASVEDVPGIGAHTDYECFTLLLADQPGLEVLNEESVWIDAPPVKNAAGEE CEEEEECCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCHHCCCCCEEEECCCCCCCCCCC AFVINIGDMLEVLSAGTFVATAHRVRKVPQERYSFPLFFACDYHTLIRPLPTFLAAGEAG EEEEEHHHHHHHHHCCHHHHHHHHHHHCHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCC EYQELSIGEHMWSQALQTYRYLREKVNRGELQLPERARGTNTFGHLKKQAQQKTP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure TAVKHAFTELPTIDIRDLAGDDLARRQAVADAIGRAAREVGFFYITGHGIDPALIAGVR CHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHH EAAKQIFALPMEEKMNYYIGHSKSHKGYVPEGEEIYGSGKPDHKEAFDIGFQAADDHPLV HHHHHHHCCCHHHHCCEEECCCCCCCCCCCCCHHCCCCCCCCCHHHHHCCCCCCCCCCEE LAGTPLIGANEWPDLPDFRARVLAYYDAVFALGHRLFDAFALALGLPEGYFKPMVTCPPA EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEECCCC KLRLIHYPFDASVEDVPGIGAHTDYECFTLLLADQPGLEVLNEESVWIDAPPVKNAAGEE CEEEEECCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCHHCCCCCEEEECCCCCCCCCCC AFVINIGDMLEVLSAGTFVATAHRVRKVPQERYSFPLFFACDYHTLIRPLPTFLAAGEAG EEEEEHHHHHHHHHCCHHHHHHHHHHHCHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCC EYQELSIGEHMWSQALQTYRYLREKVNRGELQLPERARGTNTFGHLKKQAQQKTP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1901702 [H]