Click here to switch to the map view.

The map label for this gene is yvrE [H]

Identifier: 238896044

GI number: 238896044

Start: 4013258

End: 4014130

Strand: Reverse

Name: yvrE [H]

Synonym: KP1_4176

Alternate gene names: 238896044

Gene position: 4014130-4013258 (Counterclockwise)

Preceding gene: 238896045

Following gene: 238896040

Centisome position: 76.48

GC content: 60.82

Gene sequence:

>873_bases
ATGGCTGAACCACAACCGCTGTTTGACTACACCGGATACCTGCCGGAATGCCCGACCTGGAGCGAGGCAGAACAGGCCCT
CTACTGGGCTGATATCATGGAATGTGAAATTCACCGCTACGATATCCGCAGCGGAGAACACCAGGTGCTGCAGTTTCCAG
AGGAGGTCGGCTGTTTTGCCCTGCGCGAGAAGGGCGGGTTTATCGTTGCATTGCGCAGCGGCATCTGGCTGACCGACGCC
CACGGCCTGCTGCGGCGGAAAGTCTGCGATAACCCGAGCAACCCGGAGCTGGCGCGGTTTAACGACGGCGGGACCGATCG
CGATGGGCGCTTTTATGCCGGTACCTTCTGGGGGCCTGGGGATTACAACGGCGCGCTGCTGATGCGAGTGGATAACGACC
TGCAGCCGAAAGTGATCCAGTGTGACATCCATGGCGCCAATGGCCTGGCCTTTAGCGCCGACCGGCGCTGGATGTATACC
TCTGATACGCCGAACGCCGTGATCTACCGTACGCCGCTGGATGAGCAGGGTGAGCCTGGCCGACGCGAAGTCTTTCGCCG
TTTTCAGCCTGGCGAAGGGATCCCTGACGGGGCGGCGATCGACGTGGAGGGATGTTACTGGAGCGCAATGTTCGACGGCT
GGCGGATCGCCCGTTTCTCGCCGCAGGGCGAGGAGCTGGAATCCTACCCGATGCCGGTACGTTGCCCGACGATGGTCTGC
TTCGGCGGGGCGGATATGAAAACGCTCTATATCACCACCACCCGGGAAAACATGGAGGACGATGAGCTGGCGCAGTATCC
GCTGTCAGGCGCCATCTTCACCCTGCCGGTAGCGGTGGCAGGGATGAAGAAATTACCGTTCCGCGAATGTTAA

Upstream 100 bases:

>100_bases
CACGCTGCTGCGTCAGGCGAACGATAATCGGCAGTAAAGCGAAAAAGATGTATACAATAAAGCCAGCGACCCGCTGGCTT
TTTTTATAGGGATGACAACG

Downstream 100 bases:

>100_bases
ACCGGATCCACCGGGACCACGTTTTCGCTAGGGTAGCAGCCGAGGACCTTCATGGAGCGGGTGATATCCGCCAGCTCCTT
CAGCGCCTTGCGCATGGGCA

Product: putative cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MAEPQPLFDYTGYLPECPTWSEAEQALYWADIMECEIHRYDIRSGEHQVLQFPEEVGCFALREKGGFIVALRSGIWLTDA
HGLLRRKVCDNPSNPELARFNDGGTDRDGRFYAGTFWGPGDYNGALLMRVDNDLQPKVIQCDIHGANGLAFSADRRWMYT
SDTPNAVIYRTPLDEQGEPGRREVFRRFQPGEGIPDGAAIDVEGCYWSAMFDGWRIARFSPQGEELESYPMPVRCPTMVC
FGGADMKTLYITTTRENMEDDELAQYPLSGAIFTLPVAVAGMKKLPFREC

Sequences:

>Translated_290_residues
MAEPQPLFDYTGYLPECPTWSEAEQALYWADIMECEIHRYDIRSGEHQVLQFPEEVGCFALREKGGFIVALRSGIWLTDA
HGLLRRKVCDNPSNPELARFNDGGTDRDGRFYAGTFWGPGDYNGALLMRVDNDLQPKVIQCDIHGANGLAFSADRRWMYT
SDTPNAVIYRTPLDEQGEPGRREVFRRFQPGEGIPDGAAIDVEGCYWSAMFDGWRIARFSPQGEELESYPMPVRCPTMVC
FGGADMKTLYITTTRENMEDDELAQYPLSGAIFTLPVAVAGMKKLPFREC
>Mature_289_residues
AEPQPLFDYTGYLPECPTWSEAEQALYWADIMECEIHRYDIRSGEHQVLQFPEEVGCFALREKGGFIVALRSGIWLTDAH
GLLRRKVCDNPSNPELARFNDGGTDRDGRFYAGTFWGPGDYNGALLMRVDNDLQPKVIQCDIHGANGLAFSADRRWMYTS
DTPNAVIYRTPLDEQGEPGRREVFRRFQPGEGIPDGAAIDVEGCYWSAMFDGWRIARFSPQGEELESYPMPVRCPTMVCF
GGADMKTLYITTTRENMEDDELAQYPLSGAIFTLPVAVAGMKKLPFREC

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=273, Percent_Identity=30.4029304029304, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI4759036, Length=273, Percent_Identity=30.4029304029304, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24646912, Length=265, Percent_Identity=28.3018867924528, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24646910, Length=265, Percent_Identity=28.3018867924528, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45551448, Length=267, Percent_Identity=28.8389513108614, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24641471, Length=267, Percent_Identity=28.8389513108614, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI18860103, Length=267, Percent_Identity=28.8389513108614, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24641469, Length=267, Percent_Identity=28.8389513108614, Blast_Score=84, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 32756; Mature: 32625

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPQPLFDYTGYLPECPTWSEAEQALYWADIMECEIHRYDIRSGEHQVLQFPEEVGCFA
CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCHHHHCCHHHHCEEE
LREKGGFIVALRSGIWLTDAHGLLRRKVCDNPSNPELARFNDGGTDRDGRFYAGTFWGPG
EECCCCEEEEEECCEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCC
DYNGALLMRVDNDLQPKVIQCDIHGANGLAFSADRRWMYTSDTPNAVIYRTPLDEQGEPG
CCCCEEEEEECCCCCCEEEEEEEECCCCEEEECCCCEEEECCCCCEEEEECCCCCCCCCC
RREVFRRFQPGEGIPDGAAIDVEGCYWSAMFDGWRIARFSPQGEELESYPMPVRCPTMVC
HHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCEEEEEECCCCCHHHCCCCCEECCEEEE
FGGADMKTLYITTTRENMEDDELAQYPLSGAIFTLPVAVAGMKKLPFREC
ECCCCEEEEEEEECCCCCCHHHHHHCCCCCCEEEEHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AEPQPLFDYTGYLPECPTWSEAEQALYWADIMECEIHRYDIRSGEHQVLQFPEEVGCFA
CCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCHHHHCCHHHHCEEE
LREKGGFIVALRSGIWLTDAHGLLRRKVCDNPSNPELARFNDGGTDRDGRFYAGTFWGPG
EECCCCEEEEEECCEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCC
DYNGALLMRVDNDLQPKVIQCDIHGANGLAFSADRRWMYTSDTPNAVIYRTPLDEQGEPG
CCCCEEEEEECCCCCCEEEEEEEECCCCEEEECCCCEEEECCCCCEEEEECCCCCCCCCC
RREVFRRFQPGEGIPDGAAIDVEGCYWSAMFDGWRIARFSPQGEELESYPMPVRCPTMVC
HHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCEEEEEECCCCCHHHCCCCCEECCEEEE
FGGADMKTLYITTTRENMEDDELAQYPLSGAIFTLPVAVAGMKKLPFREC
ECCCCEEEEEEEECCCCCCHHHHHHCCCCCCEEEEHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]