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The map label for this gene is yohM

Identifier: 238895992

GI number: 238895992

Start: 3949277

End: 3950257

Strand: Reverse

Name: yohM

Synonym: KP1_4119

Alternate gene names: NA

Gene position: 3950257-3949277 (Counterclockwise)

Preceding gene: 238895993

Following gene: 238895991

Centisome position: 75.26

GC content: 64.53

Gene sequence:

>981_bases
ATGTCAGTAATTTTTACTCCGCGCGCGCGATTTTCGCGCTGGAAAGCGCTGTGGCCGCTGGCGCTGTTGCTGGCGGTGAG
CATCATCGGCGGCATTTGGCTGTGGCGGGCGTGGCCGCAGGTGCTGATGCAGAGCGCAGTCTGGCAGCGTTCGCTCAACC
TGGAACTCAGCCGCCTGCTGCAGGCGGTGGCGGAGAACCCGGCGGCGGCAGGGCTGTCGCTGCTGGGGTTTAGCTTCGTT
TACGGGGTGCTCCATGCCTTAGGGCCCGGACACGGTAAAATTGTCATTACGACCTGGCTTGCCACCCATCCCGCGAAGCT
GAAATCAAGCATTGGCCTGACGCTGGCCGCTTCTTTACTGCAGGGGCTGGTAGCCATCGCGCTGGTGGTCGTGGTGCTGG
CGCTGCTGCAGCTGCCGGCGCGCCAGCTGCACCTCAGCAGTTTCTGGCTGGAGAAGGGGAGCTATTTGCTGGTGGGTGCG
TTAGGGCTGCTGCTGTGCTGGCGGGCGTTAAAAAAGCTGCGTCTGCTGCTGAGCCGGCCAACGTTTACCGCTTTTACCCC
GCACCATGTTCATAACGAACACTGCGGCTGCGGGCATCAGCATCTCCCGGCCCCGGAGCAGCTGCAGGCCGGCGACGACT
GGCGGGCTCGCGCCGCGATCGTCCTGTCGATGGGTATGCGTCCCTGCTCGGGGGCGATCATGGTTCTGCTGTTCAGCAAG
GTAATCGGCGTTTTTGGCTGGGGGATGGCGGCGGCGCTGGCGATGGCGGCGGGAACCTCGTTGACTATCACGGCGCTGGC
GCTGTTGGTGCATGGGTTCCGCCAACTGGCGATCCGCCTCAGTCGCCATCAGGCGCCAGCGTTATGGAAGCAGGTTAGTT
GGGCGACGCTGGCGCTGGCCGGCGGCGTCATATTGCTGGCGGCGGCAGGGGTGATGTGGCTCAGCGCCGTCCCTGCCGGC
GGTGGGATCCGTCCGTTTTAG

Upstream 100 bases:

>100_bases
ACGACAAAATGCTCTCATACGCCCAGTCGCTGGATAAAGCGGATGCGCCGCCGGAGGATATGGCGCTGGGCAGCTATTTT
GCCCAGAAGGTGACCCTGAC

Downstream 100 bases:

>100_bases
ACAGACGCCGGGCGCAAATCCTAAAGTGGGCGCCAGCGCTTGCCGCTGGCGAAGCGATGCTCTAGTTTTCCGCTTTTCGG
CGGATGACAAGGAGTCGCTA

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSVIFTPRARFSRWKALWPLALLLAVSIIGGIWLWRAWPQVLMQSAVWQRSLNLELSRLLQAVAENPAAAGLSLLGFSFV
YGVLHALGPGHGKIVITTWLATHPAKLKSSIGLTLAASLLQGLVAIALVVVVLALLQLPARQLHLSSFWLEKGSYLLVGA
LGLLLCWRALKKLRLLLSRPTFTAFTPHHVHNEHCGCGHQHLPAPEQLQAGDDWRARAAIVLSMGMRPCSGAIMVLLFSK
VIGVFGWGMAAALAMAAGTSLTITALALLVHGFRQLAIRLSRHQAPALWKQVSWATLALAGGVILLAAAGVMWLSAVPAG
GGIRPF

Sequences:

>Translated_326_residues
MSVIFTPRARFSRWKALWPLALLLAVSIIGGIWLWRAWPQVLMQSAVWQRSLNLELSRLLQAVAENPAAAGLSLLGFSFV
YGVLHALGPGHGKIVITTWLATHPAKLKSSIGLTLAASLLQGLVAIALVVVVLALLQLPARQLHLSSFWLEKGSYLLVGA
LGLLLCWRALKKLRLLLSRPTFTAFTPHHVHNEHCGCGHQHLPAPEQLQAGDDWRARAAIVLSMGMRPCSGAIMVLLFSK
VIGVFGWGMAAALAMAAGTSLTITALALLVHGFRQLAIRLSRHQAPALWKQVSWATLALAGGVILLAAAGVMWLSAVPAG
GGIRPF
>Mature_325_residues
SVIFTPRARFSRWKALWPLALLLAVSIIGGIWLWRAWPQVLMQSAVWQRSLNLELSRLLQAVAENPAAAGLSLLGFSFVY
GVLHALGPGHGKIVITTWLATHPAKLKSSIGLTLAASLLQGLVAIALVVVVLALLQLPARQLHLSSFWLEKGSYLLVGAL
GLLLCWRALKKLRLLLSRPTFTAFTPHHVHNEHCGCGHQHLPAPEQLQAGDDWRARAAIVLSMGMRPCSGAIMVLLFSKV
IGVFGWGMAAALAMAAGTSLTITALALLVHGFRQLAIRLSRHQAPALWKQVSWATLALAGGVILLAAAGVMWLSAVPAGG
GIRPF

Specific function: Efflux system for nickel and cobalt (Potential) [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 35002; Mature: 34871

Theoretical pI: Translated: 11.94; Mature: 11.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIFTPRARFSRWKALWPLALLLAVSIIGGIWLWRAWPQVLMQSAVWQRSLNLELSRLL
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QAVAENPAAAGLSLLGFSFVYGVLHALGPGHGKIVITTWLATHPAKLKSSIGLTLAASLL
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHHH
QGLVAIALVVVVLALLQLPARQLHLSSFWLEKGSYLLVGALGLLLCWRALKKLRLLLSRP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
TFTAFTPHHVHNEHCGCGHQHLPAPEQLQAGDDWRARAAIVLSMGMRPCSGAIMVLLFSK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
VIGVFGWGMAAALAMAAGTSLTITALALLVHGFRQLAIRLSRHQAPALWKQVSWATLALA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GGVILLAAAGVMWLSAVPAGGGIRPF
HHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SVIFTPRARFSRWKALWPLALLLAVSIIGGIWLWRAWPQVLMQSAVWQRSLNLELSRLL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QAVAENPAAAGLSLLGFSFVYGVLHALGPGHGKIVITTWLATHPAKLKSSIGLTLAASLL
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHHH
QGLVAIALVVVVLALLQLPARQLHLSSFWLEKGSYLLVGALGLLLCWRALKKLRLLLSRP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
TFTAFTPHHVHNEHCGCGHQHLPAPEQLQAGDDWRARAAIVLSMGMRPCSGAIMVLLFSK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
VIGVFGWGMAAALAMAAGTSLTITALALLVHGFRQLAIRLSRHQAPALWKQVSWATLALA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GGVILLAAAGVMWLSAVPAGGGIRPF
HHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]