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The map label for this gene is yfgC [H]

Identifier: 238895943

GI number: 238895943

Start: 3890985

End: 3892448

Strand: Direct

Name: yfgC [H]

Synonym: KP1_4068

Alternate gene names: 238895943

Gene position: 3890985-3892448 (Clockwise)

Preceding gene: 238895942

Following gene: 238895944

Centisome position: 74.13

GC content: 60.66

Gene sequence:

>1464_bases
ATGTTCAGGCAGTTGAAGAAAACGCTGGTGGCGACCGCGATCGCGTCGCTGACGCTGGGTTCGATAGGTCCTGCTTTTGC
TGACTCCGCAGATACCCTGCCGGACATGGGAACCTCCGCAGGAAGCACGCTGTCAATCGGTCAGGAAATGCAGATGGGGG
ATTACTACGTCCGCCAACTGCGCGGTAGCGCGCCGCTGATCAACGACCCTCTGCTGGTGCAATATATCAACGGGCTGGGT
ATGCGTCTGGTGGCTCACGCCAACTCGGTGCGTACCCCGTTCCACTTCTATTTGATTAATAACGACCAGATCAACGCCTT
CGCCTTCTTCGGCGGCAATGTGGTCCTCCACTCCGCCCTGTTCCGCTACTCTGATAACGAGAGCGAACTGGCCTCTGTCA
TGGCGCACGAAATCTCCCACGTGACGCAGCGCCATCTCGCCCGCGCGATGGAAGATCAGAAGCGCAACGCGCCGCTGACC
TGGGTCGGCGCGCTGGGTTCAATTTTGCTGGCGATGGCCAGCCCGCAGGCCGGAATGGCGGCCCTGACCGGGACGCTGGC
CGGTACTCAGCAGGGTATGATCAGCTTCACCCGCCAGAACGAAGAAGAGGCCGACCGGATTGGCATTCAGGTTCTGCAGC
GCTCGGGTTTCGACCCACAGGCCATGCCGATGTTTATGGGTAAACTGCTTGACGAGTCGCGCTACTCGACGCGACCGCCG
GAAATGTTGCTCACCCACCCCCTGCCGGAAAGCCGACTGGCCGATGCCCGTAACCGCGCCAACCAGATGCGCCCGGTGGT
GGTACAGTCCTCGGCGGACTTCTATCTGGCGAAGGCGCGTACCCTCGGGATGTACACCAACGGCGACAACAAGCTGGGCA
CCGATCTGCTGAACGCCTGGGATAAAGGCAATATCCGCCAACAGCATGCCGCCCAGTATGGTCGCGCTCTGCTGGCGATG
GAAAGCAATAACTTTGACCAGGCACGCAAAACGCTGCAGCCGCTGCTCAACGCCGACCCGCAAAATGCCTGGTATCTCGA
TCTGGCCACCGATATCGACCTCGGACAGAAGAAAACCAGTGACGCCATCAATCGCCTTAAAAACGCCCGCGAGCTGCGTA
CTAATCCGGTGCTGCAGCTGAACCTGGCCAACGCCCTGCTGCAGGGCGGGCAGCCCGGGGAAGCGGCGACCATTCTGAAC
CGGTATACCTTTACCTATAAAGAGGATGGCAACGGCTGGGACCTGCTGGCCCAGGCGGAAGGCGCGCTGGGCAATCGCGA
TCAGGAGCTGGCGGCGCGGGCTGAAAGCATGGCGCTGGTCGGCCAGCTGGAGCAGGCGATTTCCCTGCTCAGCAGCGCCA
GCTCGCAGGTGAAACTGGGTAGCCTGCAGCAGGCACGTTACGATGCCCGTATCGATCAGCTACGCGATCTGCAGGCTCGC
TTCCGTCCCTATCAAAAAATGTAA

Upstream 100 bases:

>100_bases
CAAGGCGGCCAACGCCAGCTAAACTCGCTGGGATGCGGCCAGGGAACATTACGCCGCACAATCGGTCAAACTGGCACACC
CACATTACAGGACAGAGGTT

Downstream 100 bases:

>100_bases
GGAGACCCCATGACCGACGCGGTAAAAATTTACCATAACCCACGCTGCTCCAAGAGCCGCGAAACGCTGAGCCTGCTGCA
GAGTCGCGGCATCGATCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MFRQLKKTLVATAIASLTLGSIGPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLVQYINGLG
MRLVAHANSVRTPFHFYLINNDQINAFAFFGGNVVLHSALFRYSDNESELASVMAHEISHVTQRHLARAMEDQKRNAPLT
WVGALGSILLAMASPQAGMAALTGTLAGTQQGMISFTRQNEEEADRIGIQVLQRSGFDPQAMPMFMGKLLDESRYSTRPP
EMLLTHPLPESRLADARNRANQMRPVVVQSSADFYLAKARTLGMYTNGDNKLGTDLLNAWDKGNIRQQHAAQYGRALLAM
ESNNFDQARKTLQPLLNADPQNAWYLDLATDIDLGQKKTSDAINRLKNARELRTNPVLQLNLANALLQGGQPGEAATILN
RYTFTYKEDGNGWDLLAQAEGALGNRDQELAARAESMALVGQLEQAISLLSSASSQVKLGSLQQARYDARIDQLRDLQAR
FRPYQKM

Sequences:

>Translated_487_residues
MFRQLKKTLVATAIASLTLGSIGPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLVQYINGLG
MRLVAHANSVRTPFHFYLINNDQINAFAFFGGNVVLHSALFRYSDNESELASVMAHEISHVTQRHLARAMEDQKRNAPLT
WVGALGSILLAMASPQAGMAALTGTLAGTQQGMISFTRQNEEEADRIGIQVLQRSGFDPQAMPMFMGKLLDESRYSTRPP
EMLLTHPLPESRLADARNRANQMRPVVVQSSADFYLAKARTLGMYTNGDNKLGTDLLNAWDKGNIRQQHAAQYGRALLAM
ESNNFDQARKTLQPLLNADPQNAWYLDLATDIDLGQKKTSDAINRLKNARELRTNPVLQLNLANALLQGGQPGEAATILN
RYTFTYKEDGNGWDLLAQAEGALGNRDQELAARAESMALVGQLEQAISLLSSASSQVKLGSLQQARYDARIDQLRDLQAR
FRPYQKM
>Mature_487_residues
MFRQLKKTLVATAIASLTLGSIGPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLVQYINGLG
MRLVAHANSVRTPFHFYLINNDQINAFAFFGGNVVLHSALFRYSDNESELASVMAHEISHVTQRHLARAMEDQKRNAPLT
WVGALGSILLAMASPQAGMAALTGTLAGTQQGMISFTRQNEEEADRIGIQVLQRSGFDPQAMPMFMGKLLDESRYSTRPP
EMLLTHPLPESRLADARNRANQMRPVVVQSSADFYLAKARTLGMYTNGDNKLGTDLLNAWDKGNIRQQHAAQYGRALLAM
ESNNFDQARKTLQPLLNADPQNAWYLDLATDIDLGQKKTSDAINRLKNARELRTNPVLQLNLANALLQGGQPGEAATILN
RYTFTYKEDGNGWDLLAQAEGALGNRDQELAARAESMALVGQLEQAISLLSSASSQVKLGSLQQARYDARIDQLRDLQAR
FRPYQKM

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=487, Percent_Identity=85.4209445585216, Blast_Score=840, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 53591; Mature: 53591

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRQLKKTLVATAIASLTLGSIGPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQL
CHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH
RGSAPLINDPLLVQYINGLGMRLVAHANSVRTPFHFYLINNDQINAFAFFGGNVVLHSAL
CCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHH
FRYSDNESELASVMAHEISHVTQRHLARAMEDQKRNAPLTWVGALGSILLAMASPQAGMA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCHH
ALTGTLAGTQQGMISFTRQNEEEADRIGIQVLQRSGFDPQAMPMFMGKLLDESRYSTRPP
HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
EMLLTHPLPESRLADARNRANQMRPVVVQSSADFYLAKARTLGMYTNGDNKLGTDLLNAW
CEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEEHEEEEEEECCCCCHHHHHHHHC
DKGNIRQQHAAQYGRALLAMESNNFDQARKTLQPLLNADPQNAWYLDLATDIDLGQKKTS
CCCCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHH
DAINRLKNARELRTNPVLQLNLANALLQGGQPGEAATILNRYTFTYKEDGNGWDLLAQAE
HHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCHHHHHHHHEEEEEEECCCCCEEEEECC
GALGNRDQELAARAESMALVGQLEQAISLLSSASSQVKLGSLQQARYDARIDQLRDLQAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHH
FRPYQKM
CCCCCCC
>Mature Secondary Structure
MFRQLKKTLVATAIASLTLGSIGPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQL
CHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH
RGSAPLINDPLLVQYINGLGMRLVAHANSVRTPFHFYLINNDQINAFAFFGGNVVLHSAL
CCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHH
FRYSDNESELASVMAHEISHVTQRHLARAMEDQKRNAPLTWVGALGSILLAMASPQAGMA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCHH
ALTGTLAGTQQGMISFTRQNEEEADRIGIQVLQRSGFDPQAMPMFMGKLLDESRYSTRPP
HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
EMLLTHPLPESRLADARNRANQMRPVVVQSSADFYLAKARTLGMYTNGDNKLGTDLLNAW
CEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEEHEEEEEEECCCCCHHHHHHHHC
DKGNIRQQHAAQYGRALLAMESNNFDQARKTLQPLLNADPQNAWYLDLATDIDLGQKKTS
CCCCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHH
DAINRLKNARELRTNPVLQLNLANALLQGGQPGEAATILNRYTFTYKEDGNGWDLLAQAE
HHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCHHHHHHHHEEEEEEECCCCCEEEEECC
GALGNRDQELAARAESMALVGQLEQAISLLSSASSQVKLGSLQQARYDARIDQLRDLQAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHH
FRPYQKM
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]