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The map label for this gene is yffI [H]

Identifier: 238895907

GI number: 238895907

Start: 3852728

End: 3853213

Strand: Reverse

Name: yffI [H]

Synonym: KP1_4031

Alternate gene names: 238895907

Gene position: 3853213-3852728 (Counterclockwise)

Preceding gene: 238895908

Following gene: 238895906

Centisome position: 73.42

GC content: 64.81

Gene sequence:

>486_bases
ATGATCAATGCGCTGGGATTGCTCGAAGTGGAGGGCATGGTCGCGGCTATAGACGCTGCGGATGCCATGCTTAAGGCGGC
CAATGTGCGCCTGCTCAGTCATGAAGTGCTCGACCCGGGCAGGTTAACGCTGGTGGTGGAGGGCGACCTGGCGGCCTGCC
GCGCCGCGCTGGATGCCGGGTCCGCCGCTGCCCGGCGGACCGGCTGCGTGATCAGCCGTCGGGAAATTGGTCGCCCGGAA
GAGGATACCCAGCGGCTGATCGGCGGTTTTCAGCCACCGCCGCCAGCGCCCATGCCGCCTGCTGACCCGGCTTCATCGGA
AGCCTTACTGACGCTGCTGGCTTCAGTTCGTCAGGGCATGACGGCCGGCGAGGTCGCCGCGCATTTTGCCTGGCCGCTGG
ATAAGGCCCGCCAGGCGCTGGAGCAGCTCTTTTCCGCAGGGACGCTACGAAAACGCAGTAGCCGCTATCGTCTCAAAAAT
CCATAA

Upstream 100 bases:

>100_bases
CGGGAAGCCAGGCCGCCTGTAAAGCCGCCTGCAATGCCTTTACCGATGCCGTTCTCGATATTGCCCGTCATCCTGTACAG
CGTGCGTAATGGAGGGAGCG

Downstream 100 bases:

>100_bases
CCTGTCGGAGGTGCCGGGAGCGGCTTGCCCCCGGCTTTAACGATTATGAAAAAGCGTCGTTCTGCAAATTTGCACCATCT
CTGTTGCGAGGCGTTGCCGG

Product: putative carboxysome structural protein for ethanolamine utilization

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MINALGLLEVEGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAGSAAARRTGCVISRREIGRPE
EDTQRLIGGFQPPPPAPMPPADPASSEALLTLLASVRQGMTAGEVAAHFAWPLDKARQALEQLFSAGTLRKRSSRYRLKN
P

Sequences:

>Translated_161_residues
MINALGLLEVEGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAGSAAARRTGCVISRREIGRPE
EDTQRLIGGFQPPPPAPMPPADPASSEALLTLLASVRQGMTAGEVAAHFAWPLDKARQALEQLFSAGTLRKRSSRYRLKN
P
>Mature_161_residues
MINALGLLEVEGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAGSAAARRTGCVISRREIGRPE
EDTQRLIGGFQPPPPAPMPPADPASSEALLTLLASVRQGMTAGEVAAHFAWPLDKARQALEQLFSAGTLRKRSSRYRLKN
P

Specific function: May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082105, Length=164, Percent_Identity=79.2682926829268, Blast_Score=230, Evalue=4e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 17061; Mature: 17061

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINALGLLEVEGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAG
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCC
SAAARRTGCVISRREIGRPEEDTQRLIGGFQPPPPAPMPPADPASSEALLTLLASVRQGM
CHHHHHHCCEEEHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
TAGEVAAHFAWPLDKARQALEQLFSAGTLRKRSSRYRLKNP
CHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCC
>Mature Secondary Structure
MINALGLLEVEGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAG
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCC
SAAARRTGCVISRREIGRPEEDTQRLIGGFQPPPPAPMPPADPASSEALLTLLASVRQGM
CHHHHHHCCEEEHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
TAGEVAAHFAWPLDKARQALEQLFSAGTLRKRSSRYRLKNP
CHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]