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The map label for this gene is accD [H]

Identifier: 238895836

GI number: 238895836

Start: 3779646

End: 3780629

Strand: Reverse

Name: accD [H]

Synonym: KP1_3954

Alternate gene names: 238895836

Gene position: 3780629-3779646 (Counterclockwise)

Preceding gene: 238895837

Following gene: 238895835

Centisome position: 72.03

GC content: 58.54

Gene sequence:

>984_bases
ATGGCATTATGCGCCCCTTACGACAAAACTGGCATCGACCAGGTTCAGGCAGAAAGGTTATCAATGAGCTGGATTGAACG
AATTAAAAGCAACATCACTCCCACCCGCAAGGCGAGCATTCCTGAGGGTGTATGGACCAAGTGCGACAGCTGCGGTCAGG
TACTCTACCGCGCCGAGCTGGAGCGCAACCTGGAGGTTTGTCCTAAGTGCGATCACCATATGCGCATGTCGGCGCGTAAT
CGCCTGCATAGCCTGTTGGATGAAGGTTCTCTGGTAGAACTGGGTAGCGAACTTGAGCCAAAAGATGTGCTGAAGTTCCG
CGATTCAAAAAAATACAAAGACCGCCTGGCGTCCGCTCAGAAAGAGACGGGCGAGAAAGACGCGCTGGTGGTGATGAAAG
GTACGCTCTACGCGATGCCGGTGGTTGCCGCCGCCTTTGAATTCTCCTTTATGGGGGGATCGATGGGTTCCGTCGTCGGC
GCACGCTTTGTACGCGCGGTGGAGCAGGCGCTGGAAGATAACTGCCCGCTGATCTGCTTCTCCGCCTCCGGTGGCGCCCG
TATGCAGGAAGCGCTGATGTCGCTGATGCAGATGGCGAAAACCTCCGCGGCGCTGGCGAAAATGCAGGAGCGCGGACTGC
CGTACATCTCCGTGCTGACCGACCCGACCATGGGCGGCGTATCGGCGAGCTTTGCGATGCTGGGCGATCTGAACATTGCC
GAGCCGAAAGCGCTGATCGGCTTTGCCGGTCCTCGCGTTATCGAGCAGACCGTACGCGAGAAGCTGCCGCCGGGATTCCA
GCGCAGTGAGTTTCTGATTGAAAAAGGGGCGATCGATATGATCGTTCGCCGTCCGGAAATGCGTCTCAAGCTGGCCAGCA
TTCTGGCGAAGCTGATGAACCTGCCGGCGCCGGTTGCCGTTTCGGAAGCGCCTCATGAAGGCGTGGTGGTGCCGCCGGCA
CCGGATCAGGAACCTGAGGCCTGA

Upstream 100 bases:

>100_bases
GGTGCAGAGCGTCACGCGCAGCGGTTTGACCACTTTTTTATCCCATGTTCCGGGATGATATGATTTAATGTGCAACATTC
ATGGTCTGTAAGAGGCAAAA

Downstream 100 bases:

>100_bases
TAAAGCAGAGGGCAGGGCCTGGCGGCGCTGCCCTTTTTTATTCATACGCGTTAACCGTCAATTCTTACGGGCATCATGGA
AAAAGATCCTATTCCTCAGG

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MALCAPYDKTGIDQVQAERLSMSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMSARN
RLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYAMPVVAAAFEFSFMGGSMGSVVG
ARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIA
EPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPVAVSEAPHEGVVVPPA
PDQEPEA

Sequences:

>Translated_327_residues
MALCAPYDKTGIDQVQAERLSMSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMSARN
RLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYAMPVVAAAFEFSFMGGSMGSVVG
ARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIA
EPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPVAVSEAPHEGVVVPPA
PDQEPEA
>Mature_326_residues
ALCAPYDKTGIDQVQAERLSMSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMSARNR
LHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYAMPVVAAAFEFSFMGGSMGSVVGA
RFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAE
PKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPVAVSEAPHEGVVVPPAP
DQEPEA

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=306, Percent_Identity=97.0588235294118, Blast_Score=603, Evalue=1e-174,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 35728; Mature: 35597

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALCAPYDKTGIDQVQAERLSMSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ERNLEVCPKCDHHMRMSARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQ
HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH
KETGEKDALVVMKGTLYAMPVVAAAFEFSFMGGSMGSVVGARFVRAVEQALEDNCPLICF
HHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
SASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIA
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCC
EPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMN
CCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHC
LPAPVAVSEAPHEGVVVPPAPDQEPEA
CCCCCEECCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
ALCAPYDKTGIDQVQAERLSMSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAEL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ERNLEVCPKCDHHMRMSARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQ
HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH
KETGEKDALVVMKGTLYAMPVVAAAFEFSFMGGSMGSVVGARFVRAVEQALEDNCPLICF
HHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
SASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIA
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCC
EPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMN
CCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHC
LPAPVAVSEAPHEGVVVPPAPDQEPEA
CCCCCEECCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA