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The map label for this gene is spr [H]

Identifier: 238895735

GI number: 238895735

Start: 3667373

End: 3667942

Strand: Direct

Name: spr [H]

Synonym: KP1_3838

Alternate gene names: 238895735

Gene position: 3667373-3667942 (Clockwise)

Preceding gene: 238895734

Following gene: 238895736

Centisome position: 69.87

GC content: 54.04

Gene sequence:

>570_bases
ATGGTCAAATCTCAGCCGATTTTGAGATATATCTTGCGGGTAGCCCCCGCGATTGCAGTAGCGGTTCTGCTTTCCGCGTG
TAGTTCAACAAGTACCGCCAGGAATATGCATTCTGAGACGCATGCTGTGGGTAGTGGCGATTTATCATCACTGCAAGCCT
CTCAGGATGAATTTGAAACGATGGTCCGTAACCTGGACGTAAAGTCCCGTTTAATGGATCAGTATGCCAGCTGGAAAGGC
GTGCGTTACCGCCTCGGCGGCAGCACCCGCAAGGGTATCGACTGCTCAGCGTTTGTGCAGCGCACCTTCCGCGAACAATT
TGGTCTGGAACTGCCGCGTTCAACTTCTGAACAGCAGGAAACCGGAAAATCGATTTCTCGTGCCCAACTGCGTACAGGCG
ATCTGGTTCTGTTTCGTGCCGGCTCTACCGGCCGCCATGTCGGGATCTACCTCGGCAACAACCAGTTTGTTCACGCCTCC
ACCAGCAGCGGGGTGACTATCTCCAGCATGGATGAGCCATACTGGAAAAAGCGCTACAATGAAGCGCGTCGAGTCCTGAG
CCGCTCGTAA

Upstream 100 bases:

>100_bases
TAAGGAATTGTCTCATTGCGGATGGGTATTTAGGCTCTAACACGTTTGGCATTTTTTATAACGACATTGTCGTTAAGGAC
AACAAGGGAAAATAAACAGC

Downstream 100 bases:

>100_bases
ACTGTCCTCCACCGCCGCCGGTTATCCCTTGGCTGGCTGCGGGATAAAAAACACTGCCCCAGGCAGTGTTTTTTTTTGCC
ACCTGGTTCTCAACGTCGCA

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MVKSQPILRYILRVAPAIAVAVLLSACSSTSTARNMHSETHAVGSGDLSSLQASQDEFETMVRNLDVKSRLMDQYASWKG
VRYRLGGSTRKGIDCSAFVQRTFREQFGLELPRSTSEQQETGKSISRAQLRTGDLVLFRAGSTGRHVGIYLGNNQFVHAS
TSSGVTISSMDEPYWKKRYNEARRVLSRS

Sequences:

>Translated_189_residues
MVKSQPILRYILRVAPAIAVAVLLSACSSTSTARNMHSETHAVGSGDLSSLQASQDEFETMVRNLDVKSRLMDQYASWKG
VRYRLGGSTRKGIDCSAFVQRTFREQFGLELPRSTSEQQETGKSISRAQLRTGDLVLFRAGSTGRHVGIYLGNNQFVHAS
TSSGVTISSMDEPYWKKRYNEARRVLSRS
>Mature_189_residues
MVKSQPILRYILRVAPAIAVAVLLSACSSTSTARNMHSETHAVGSGDLSSLQASQDEFETMVRNLDVKSRLMDQYASWKG
VRYRLGGSTRKGIDCSAFVQRTFREQFGLELPRSTSEQQETGKSISRAQLRTGDLVLFRAGSTGRHVGIYLGNNQFVHAS
TSSGVTISSMDEPYWKKRYNEARRVLSRS

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=189, Percent_Identity=86.2433862433862, Blast_Score=340, Evalue=3e-95,
Organism=Escherichia coli, GI1788001, Length=123, Percent_Identity=52.0325203252033, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1787944, Length=150, Percent_Identity=34, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786421, Length=114, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 20998; Mature: 20998

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSQPILRYILRVAPAIAVAVLLSACSSTSTARNMHSETHAVGSGDLSSLQASQDEFET
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
MVRNLDVKSRLMDQYASWKGVRYRLGGSTRKGIDCSAFVQRTFREQFGLELPRSTSEQQE
HHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH
TGKSISRAQLRTGDLVLFRAGSTGRHVGIYLGNNQFVHASTSSGVTISSMDEPYWKKRYN
HHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEECCCCHHHHHHHH
EARRVLSRS
HHHHHHCCC
>Mature Secondary Structure
MVKSQPILRYILRVAPAIAVAVLLSACSSTSTARNMHSETHAVGSGDLSSLQASQDEFET
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
MVRNLDVKSRLMDQYASWKGVRYRLGGSTRKGIDCSAFVQRTFREQFGLELPRSTSEQQE
HHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH
TGKSISRAQLRTGDLVLFRAGSTGRHVGIYLGNNQFVHASTSSGVTISSMDEPYWKKRYN
HHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEECCCCHHHHHHHH
EARRVLSRS
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]