| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is dld [H]
Identifier: 238895695
GI number: 238895695
Start: 3622831
End: 3624576
Strand: Direct
Name: dld [H]
Synonym: KP1_3796
Alternate gene names: 238895695
Gene position: 3622831-3624576 (Clockwise)
Preceding gene: 238895686
Following gene: 238895696
Centisome position: 69.03
GC content: 59.79
Gene sequence:
>1746_bases ATGTCATCTGCACCCACTGACACCCATAAAACGTTTCTGGCTGACCTGGCGCGCCTGGTTGGCCCTTCGCATCTGCTGAC CGACCCGGCAAAAACCCAGCGCTACCGCAAAGGCTTCCGCTCCGGTCAGGGCGAGGCCCTGGCGGTTGTCTTTCCCGGTA CCCTGCTGGAGCTCTGGCGCGTGCTCAACGCCTGCGTAGACGCCGATAAAATTATTCTGATGCAGGCGGCCAACACCGGC CTGACCGAAGGTTCGACCCCCAACGGCAATGATTACGATCGCGAGATCGTGATTATCAGCACCCTGCGCCTGGACAAACT GCATCTGCTGGACAAAGGCGAGCAGGTGCTGGCCTGGCCCGGCACCACCCTCTATTCGCTGGAAAAAGCGCTCAAACCGC TGGGACGCGAACCGCACTCGGTGATCGGTTCGTCATGCATCGGCGCGTCGGTCATCGGCGGGATCTGCAACAACTCCGGC GGCTCGCTGGTGCAGCGCGGGCCGGCCTACACTGAGATGTCGCTGTTCGCGCAGATTGACGCCGACGGCAAGCTGAAGCT GGTCAATCATCTGGGCATCGATCTCGGCAGCACGCCGGAGCAGATCCTCAGCCGCCTCGATGACGAACGGATTAGCGATA GCGATGTCCTGCACGACGGCCGCCACGCCCACGATCACGACTATGTCACCCGCGTACGCGATGTCGATGCCGACACCCCG GCGCGCTATAACGCCGACCCGGACCGCCTGTTCGAATCCTCCGGCTGCGCCGGCAAGCTGGCGGTTTTCGCCGTGCGTCT CGATACTTTCCCGGCGGAAAAGCGCCAGCAGGTGTTTTACATTGGCACCAACCAGCCGCAGGTATTGACCGAGATCCGCC GCCATATCCTCGCCGAGTTCCAGCATCTGCCGGTGGCGGGGGAATATATGCACCGCGATATTTACGATATCGCCGAGAAG TATGGCAAAGACACCTTCCTGATGATCGACAAGCTCGGCACCGACAAAATGCCGTTCTTCTTCACCATGAAGGGGCGCAC CGACGCGATGCTGGAGAAAGTCTCGCTGTTTAAGCCGCACTTTACCGACCGCTTTATGCAGAAGCTCGGCCACGTCTTCC CGGCGCATTTACCGGAGCGGATGAAAACCTGGCGTGATAAATATGAACATCATCTGCTACTGAAGATGGCTGGCGACGGC ATCGAAGAAGCGCAGCGTTGGTTGACGGAGTACTTCCAGCAGGCCGAGGGGGATTTCTTCGCCTGTACGCCGGAGGAAGG CAGCAAGGCGTTCCTCCATCGCTTTGCCGCCGCCGGCGCGGCAATCCGCTATCAGGCGGTGCATGCCGACGAAGTCGAAG ATATTCTGGCGCTGGATATCGCCCTGCGCCGTAACGATACCGAGTGGTTCGAACATCTGCCGCCCGAAATCGACAGCCAG CTGGTGCATAAGCTCTACTATGGCCACTTTATGTGCCATGTGTTCCATCAGGATTACATCGTCAGGAAAGGGGTCGACGC CCACGCGCTGAAGGAAAAAATGCTGGAGTTACTGAAAGCGCGCGGCGCCCAGTACCCGGCGGAGCATAACGTGGGTCATC TGTATGAGGCCCCGGAGAGCCTGCAGCAGTTCTATCGCCAGAACGATCCCACCAACAGCATGAACCCGGGGATTGGTAAA ACCAGCAAGCAGAAATACTGGGGTGAAGCGGCCCCGACGCCAGCCTCTCCGGCGGATCCGCAATAA
Upstream 100 bases:
>100_bases GGTTCTTCTCTGATTTTTGCGAAACATTCATGCATCAAATTGTCATACAAAGCGCTATGCTTATCCTCGATATTTCGCGC ACCACCACAAGGAGTGGAAC
Downstream 100 bases:
>100_bases TCGACGGCAGGACTATTCAGCCTAGCGCTTCTGTATTACGCTGCACGCCGGAGAATGTTTCTCCGGCAGATTCAGGAGCG CCGCCATGCCCGCAGAGGCC
Product: D-lactate dehydrogenase
Products: NA
Alternate protein names: Respiratory D-lactate dehydrogenase [H]
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MSSAPTDTHKTFLADLARLVGPSHLLTDPAKTQRYRKGFRSGQGEALAVVFPGTLLELWRVLNACVDADKIILMQAANTG LTEGSTPNGNDYDREIVIISTLRLDKLHLLDKGEQVLAWPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG GSLVQRGPAYTEMSLFAQIDADGKLKLVNHLGIDLGSTPEQILSRLDDERISDSDVLHDGRHAHDHDYVTRVRDVDADTP ARYNADPDRLFESSGCAGKLAVFAVRLDTFPAEKRQQVFYIGTNQPQVLTEIRRHILAEFQHLPVAGEYMHRDIYDIAEK YGKDTFLMIDKLGTDKMPFFFTMKGRTDAMLEKVSLFKPHFTDRFMQKLGHVFPAHLPERMKTWRDKYEHHLLLKMAGDG IEEAQRWLTEYFQQAEGDFFACTPEEGSKAFLHRFAAAGAAIRYQAVHADEVEDILALDIALRRNDTEWFEHLPPEIDSQ LVHKLYYGHFMCHVFHQDYIVRKGVDAHALKEKMLELLKARGAQYPAEHNVGHLYEAPESLQQFYRQNDPTNSMNPGIGK TSKQKYWGEAAPTPASPADPQ
Sequences:
>Translated_581_residues MSSAPTDTHKTFLADLARLVGPSHLLTDPAKTQRYRKGFRSGQGEALAVVFPGTLLELWRVLNACVDADKIILMQAANTG LTEGSTPNGNDYDREIVIISTLRLDKLHLLDKGEQVLAWPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG GSLVQRGPAYTEMSLFAQIDADGKLKLVNHLGIDLGSTPEQILSRLDDERISDSDVLHDGRHAHDHDYVTRVRDVDADTP ARYNADPDRLFESSGCAGKLAVFAVRLDTFPAEKRQQVFYIGTNQPQVLTEIRRHILAEFQHLPVAGEYMHRDIYDIAEK YGKDTFLMIDKLGTDKMPFFFTMKGRTDAMLEKVSLFKPHFTDRFMQKLGHVFPAHLPERMKTWRDKYEHHLLLKMAGDG IEEAQRWLTEYFQQAEGDFFACTPEEGSKAFLHRFAAAGAAIRYQAVHADEVEDILALDIALRRNDTEWFEHLPPEIDSQ LVHKLYYGHFMCHVFHQDYIVRKGVDAHALKEKMLELLKARGAQYPAEHNVGHLYEAPESLQQFYRQNDPTNSMNPGIGK TSKQKYWGEAAPTPASPADPQ >Mature_580_residues SSAPTDTHKTFLADLARLVGPSHLLTDPAKTQRYRKGFRSGQGEALAVVFPGTLLELWRVLNACVDADKIILMQAANTGL TEGSTPNGNDYDREIVIISTLRLDKLHLLDKGEQVLAWPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGG SLVQRGPAYTEMSLFAQIDADGKLKLVNHLGIDLGSTPEQILSRLDDERISDSDVLHDGRHAHDHDYVTRVRDVDADTPA RYNADPDRLFESSGCAGKLAVFAVRLDTFPAEKRQQVFYIGTNQPQVLTEIRRHILAEFQHLPVAGEYMHRDIYDIAEKY GKDTFLMIDKLGTDKMPFFFTMKGRTDAMLEKVSLFKPHFTDRFMQKLGHVFPAHLPERMKTWRDKYEHHLLLKMAGDGI EEAQRWLTEYFQQAEGDFFACTPEEGSKAFLHRFAAAGAAIRYQAVHADEVEDILALDIALRRNDTEWFEHLPPEIDSQL VHKLYYGHFMCHVFHQDYIVRKGVDAHALKEKMLELLKARGAQYPAEHNVGHLYEAPESLQQFYRQNDPTNSMNPGIGKT SKQKYWGEAAPTPASPADPQ
Specific function: First component of the membrane-bound D-lactate oxidase, which is believed to play an important role in the energization of the active transport of a variety of sugars and amino acids [H]
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788454, Length=570, Percent_Identity=87.0175438596491, Blast_Score=1036, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016172 - InterPro: IPR016173 - InterPro: IPR012256 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016164 - InterPro: IPR016168 - InterPro: IPR015409 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF09330 Lact-deh-memb [H]
EC number: =1.1.1.28 [H]
Molecular weight: Translated: 65322; Mature: 65191
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAPTDTHKTFLADLARLVGPSHLLTDPAKTQRYRKGFRSGQGEALAVVFPGTLLELWR CCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHH VLNACVDADKIILMQAANTGLTEGSTPNGNDYDREIVIISTLRLDKLHLLDKGEQVLAWP HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHCCCCEEEECC GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFAQID CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHEEHEEEEC ADGKLKLVNHLGIDLGSTPEQILSRLDDERISDSDVLHDGRHAHDHDYVTRVRDVDADTP CCCCEEEHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCC ARYNADPDRLFESSGCAGKLAVFAVRLDTFPAEKRQQVFYIGTNQPQVLTEIRRHILAEF CCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH QHLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGTDKMPFFFTMKGRTDAMLEKVSLFKPH HCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCC FTDRFMQKLGHVFPAHLPERMKTWRDKYEHHLLLKMAGDGIEEAQRWLTEYFQQAEGDFF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCEE ACTPEEGSKAFLHRFAAAGAAIRYQAVHADEVEDILALDIALRRNDTEWFEHLPPEIDSQ EECCCCCHHHHHHHHHHCCHHHEEEECCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHH LVHKLYYGHFMCHVFHQDYIVRKGVDAHALKEKMLELLKARGAQYPAEHNVGHLYEAPES HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHH LQQFYRQNDPTNSMNPGIGKTSKQKYWGEAAPTPASPADPQ HHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SSAPTDTHKTFLADLARLVGPSHLLTDPAKTQRYRKGFRSGQGEALAVVFPGTLLELWR CCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHH VLNACVDADKIILMQAANTGLTEGSTPNGNDYDREIVIISTLRLDKLHLLDKGEQVLAWP HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHCCCCEEEECC GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFAQID CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHEEHEEEEC ADGKLKLVNHLGIDLGSTPEQILSRLDDERISDSDVLHDGRHAHDHDYVTRVRDVDADTP CCCCEEEHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCC ARYNADPDRLFESSGCAGKLAVFAVRLDTFPAEKRQQVFYIGTNQPQVLTEIRRHILAEF CCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH QHLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGTDKMPFFFTMKGRTDAMLEKVSLFKPH HCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCC FTDRFMQKLGHVFPAHLPERMKTWRDKYEHHLLLKMAGDGIEEAQRWLTEYFQQAEGDFF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCEE ACTPEEGSKAFLHRFAAAGAAIRYQAVHADEVEDILALDIALRRNDTEWFEHLPPEIDSQ EECCCCCHHHHHHHHHHCCHHHEEEECCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHH LVHKLYYGHFMCHVFHQDYIVRKGVDAHALKEKMLELLKARGAQYPAEHNVGHLYEAPES HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHH LQQFYRQNDPTNSMNPGIGKTSKQKYWGEAAPTPASPADPQ HHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6386470; 3882663; 9278503; 10944213 [H]