Click here to switch to the map view.

The map label for this gene is yohN [H]

Identifier: 238895683

GI number: 238895683

Start: 3609034

End: 3609378

Strand: Direct

Name: yohN [H]

Synonym: KP1_3780

Alternate gene names: 238895683

Gene position: 3609034-3609378 (Clockwise)

Preceding gene: 238895681

Following gene: 238895684

Centisome position: 68.76

GC content: 53.62

Gene sequence:

>345_bases
TTGAGTCCAGGTAATATTGAGGAAACTATGCGTAAAACAAAAATGATGCTTCTGGGCGTACTTCTTGCCACCGCTGGCGC
CAGCTGGACGGCTACTGCCGCGGGGATCGATCAGTATGCGCTGAAAGAGTTCACCGCCGATTTCACCCAGTTTCACATCG
GCGACACCGTTCCGGCGATGTATCTCACCCCGGAATACAACATTAAACAGTGGCAGCAGCGTAACCTGCCTGCGCCGGAC
GCCGGCAGCCACTGGACCTATATGGGCGGTAACTACGTGCTGATCACCGATACCGAAGGCAAAATCCTCAAAGTGTACGA
TGGCGAGATCTTCTATCATCGCTGA

Upstream 100 bases:

>100_bases
GCAAGCGGCACAAGACTTGCGCCGCGTTTTGCTTACACTTTTTAAAAATCCAGTGCTTGCCATTTCAGCAACGCATCAGG
AATGATACGAGGCTGCTATT

Downstream 100 bases:

>100_bases
TCCGCGCAATCTCCACGTCCGCCCCGGCGAGCCAGCGGACTCTCCGGCGCTGCGCCAGATCTTCCTGCGGGCGCGCAGTT
TATCGTGGACCTGGCTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSPGNIEETMRKTKMMLLGVLLATAGASWTATAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPD
AGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR

Sequences:

>Translated_114_residues
MSPGNIEETMRKTKMMLLGVLLATAGASWTATAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPD
AGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
>Mature_113_residues
SPGNIEETMRKTKMMLLGVLLATAGASWTATAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDA
GSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR

Specific function: Unknown

COG id: COG5455

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082044, Length=109, Percent_Identity=62.3853211009174, Blast_Score=139, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12826; Mature: 12695

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGNIEETMRKTKMMLLGVLLATAGASWTATAAGIDQYALKEFTADFTQFHIGDTVPAM
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCHHHHHHHHHHHHHEEECCCCCCEE
YLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
EECCCCCCHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCEEEEECCEEEEEC
>Mature Secondary Structure 
SPGNIEETMRKTKMMLLGVLLATAGASWTATAAGIDQYALKEFTADFTQFHIGDTVPAM
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCHHHHHHHHHHHHHEEECCCCCCEE
YLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
EECCCCCCHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]