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The map label for this gene is dppC [H]

Identifier: 238895657

GI number: 238895657

Start: 3576741

End: 3577646

Strand: Reverse

Name: dppC [H]

Synonym: KP1_3753

Alternate gene names: 238895657

Gene position: 3577646-3576741 (Counterclockwise)

Preceding gene: 238895658

Following gene: 238895656

Centisome position: 68.16

GC content: 61.15

Gene sequence:

>906_bases
ATGACCGTTTCTCTGGATTCGCCGCTTTCGGGTGGTGCGGGCGAAGGCCGTCAGCGGCTGCAACGCGCGGCGGCGCGGGC
CGTCGGGTTTATCGGCAAAATGGCGCGCAATCCGCTCACGGCCATCGGCGGAGGAATTATCTTTATGCTGCTGGTGGTGG
CGATTTTCGCGCCGCTGATTGCGCCTTATAACCCGCTGGTACAGGACCTGAATAGTGCGCTGGTCGCGCCGAATGCGCAG
CACTGGTTCGGCACCGATGAGTTTGGCCGGGATATCTTTAGTCGCCTGGTGTACGGCTCCCGCATCACGCTCTATATCGT
GCTGCTGGTCTCAGTGACCGTCGGTCCGCTCGGACTGCTGCTGGGCGTCAGCGCCGGCTATTTCGGCGGTAAAGTCGATA
TGGTGCTGATGCGCGTCACCGATATTTTCATCTCCTTCCCGAGTCTGGTCCTGGCGCTAGCGTTTGTCGCCGCTTTAGGA
CCGGGGCTGGAGCACGTGGTTATCGCCATCACGCTGACCGCCTGGCCGCCGATTGCCCGTCTGGCGCGCGCCGAAACGCT
CTCTCTGCGCCAGGCTGATTTTATCTCCGCCGTGCGTCTGCAGGGCGCTTCATCGGCCCGCGTCCTCTGGCGCCATATCG
TGCCGCTGTGTCTGCCCTCGGTCATTATCCGTATCACCATGAATATGGCCGGGATCATTCTGACCGCGGCCGGCCTAGGC
TTTCTCGGCCTCGGCGCGCAGCCGCCAGAGCCGGAGTGGGGAGCGATGATCTCCAGCGGGCGCACTTATATGATGGAGTG
CTGGTGGGTCGTAACCATTCCGGGGCTGGCGATTTTGATCAATAGCTTAGCGTTCAACTTCTTAGGAGATGGCCTACGTG
ACATCCTCGATCCCCGTAGTGAATAA

Upstream 100 bases:

>100_bases
ATGCGGTGATGGGCTGCGTGCTGCTGGTGGGGGTGATCTTCGTGATGCTCAACCTGCTCTCCGACATGCTGTATCAATTC
TTTGACCCGAGGACAAAATC

Downstream 100 bases:

>100_bases
TGCACCGCTGCTCGACGTGCGCGATTTGTGCGTCGACTTTGTTAACGGTAGCGCGGTGACCCACGCCGTGCGCGGCGTCT
CCTTCCAGCTGGGGCATGAG

Product: putative dipeptide ABC transport system permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTVSLDSPLSGGAGEGRQRLQRAAARAVGFIGKMARNPLTAIGGGIIFMLLVVAIFAPLIAPYNPLVQDLNSALVAPNAQ
HWFGTDEFGRDIFSRLVYGSRITLYIVLLVSVTVGPLGLLLGVSAGYFGGKVDMVLMRVTDIFISFPSLVLALAFVAALG
PGLEHVVIAITLTAWPPIARLARAETLSLRQADFISAVRLQGASSARVLWRHIVPLCLPSVIIRITMNMAGIILTAAGLG
FLGLGAQPPEPEWGAMISSGRTYMMECWWVVTIPGLAILINSLAFNFLGDGLRDILDPRSE

Sequences:

>Translated_301_residues
MTVSLDSPLSGGAGEGRQRLQRAAARAVGFIGKMARNPLTAIGGGIIFMLLVVAIFAPLIAPYNPLVQDLNSALVAPNAQ
HWFGTDEFGRDIFSRLVYGSRITLYIVLLVSVTVGPLGLLLGVSAGYFGGKVDMVLMRVTDIFISFPSLVLALAFVAALG
PGLEHVVIAITLTAWPPIARLARAETLSLRQADFISAVRLQGASSARVLWRHIVPLCLPSVIIRITMNMAGIILTAAGLG
FLGLGAQPPEPEWGAMISSGRTYMMECWWVVTIPGLAILINSLAFNFLGDGLRDILDPRSE
>Mature_300_residues
TVSLDSPLSGGAGEGRQRLQRAAARAVGFIGKMARNPLTAIGGGIIFMLLVVAIFAPLIAPYNPLVQDLNSALVAPNAQH
WFGTDEFGRDIFSRLVYGSRITLYIVLLVSVTVGPLGLLLGVSAGYFGGKVDMVLMRVTDIFISFPSLVLALAFVAALGP
GLEHVVIAITLTAWPPIARLARAETLSLRQADFISAVRLQGASSARVLWRHIVPLCLPSVIIRITMNMAGIILTAAGLGF
LGLGAQPPEPEWGAMISSGRTYMMECWWVVTIPGLAILINSLAFNFLGDGLRDILDPRSE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=264, Percent_Identity=43.9393939393939, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1787054, Length=271, Percent_Identity=44.280442804428, Blast_Score=221, Evalue=5e-59,
Organism=Escherichia coli, GI1789964, Length=256, Percent_Identity=47.65625, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1789889, Length=242, Percent_Identity=45.0413223140496, Blast_Score=204, Evalue=6e-54,
Organism=Escherichia coli, GI1787498, Length=290, Percent_Identity=34.8275862068965, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1787549, Length=250, Percent_Identity=36.4, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=29.3333333333333, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32121; Mature: 31989

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSLDSPLSGGAGEGRQRLQRAAARAVGFIGKMARNPLTAIGGGIIFMLLVVAIFAPLI
CEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
APYNPLVQDLNSALVAPNAQHWFGTDEFGRDIFSRLVYGSRITLYIVLLVSVTVGPLGLL
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LGVSAGYFGGKVDMVLMRVTDIFISFPSLVLALAFVAALGPGLEHVVIAITLTAWPPIAR
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCHHHH
LARAETLSLRQADFISAVRLQGASSARVLWRHIVPLCLPSVIIRITMNMAGIILTAAGLG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGLGAQPPEPEWGAMISSGRTYMMECWWVVTIPGLAILINSLAFNFLGDGLRDILDPRS
HHCCCCCCCCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
E
C
>Mature Secondary Structure 
TVSLDSPLSGGAGEGRQRLQRAAARAVGFIGKMARNPLTAIGGGIIFMLLVVAIFAPLI
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
APYNPLVQDLNSALVAPNAQHWFGTDEFGRDIFSRLVYGSRITLYIVLLVSVTVGPLGLL
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LGVSAGYFGGKVDMVLMRVTDIFISFPSLVLALAFVAALGPGLEHVVIAITLTAWPPIAR
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCHHHH
LARAETLSLRQADFISAVRLQGASSARVLWRHIVPLCLPSVIIRITMNMAGIILTAAGLG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGLGAQPPEPEWGAMISSGRTYMMECWWVVTIPGLAILINSLAFNFLGDGLRDILDPRS
HHCCCCCCCCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]