| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is dppF [C]
Identifier: 238895656
GI number: 238895656
Start: 3575906
End: 3576778
Strand: Reverse
Name: dppF [C]
Synonym: KP1_3752
Alternate gene names: 238895656
Gene position: 3576778-3575906 (Counterclockwise)
Preceding gene: 238895657
Following gene: 238895655
Centisome position: 68.15
GC content: 59.79
Gene sequence:
>873_bases ATGGCCTACGTGACATCCTCGATCCCCGTAGTGAATAATGCACCGCTGCTCGACGTGCGCGATTTGTGCGTCGACTTTGT TAACGGTAGCGCGGTGACCCACGCCGTGCGCGGCGTCTCCTTCCAGCTGGGGCATGAGAAGCTGGCCATTGTCGGCGAAT CCGGTTCGGGTAAGTCCACCGTTGGGCGCGCGCTGCTGCAGCTGCATCCGAAAAAGGCCCGCGTCAGCGCCAGCCGGATG CAGTTTGCCGACCTCGATCTGCAGCATCTTAGCGAAGCGCAGATGCGCGGCGTACGCGGCAAACGTATCTCGATGATTAT GCAGGATCCGAAATATTCGCTGAATCCGGTGGTCTGCGTGGGTAAGCAAATCGCCGAGGCCTGGCTTACTCATCATCCCG GGCGCAAAGATGAGGCGAAAGCCAGGGCGCTGGAGATGCTGGAGGTGGTGCGTATTCGCCAACCGGAGCGCGTTTATCAG CTTTATCCGCATGAAATATCCGGCGGACAGGGGCAGCGCATCATGATCGCCATGATGCTGATTACCGACCCGGAGCTGAT CATTGCCGATGAGCCCACCTCCGCGCTGGACGTGTCGGTGCGACTGCAGGTGCTGGGCCTGCTGGATGACCTGGTTCAGT CGCGCGGGCTGGGGCTGATTTTTATCAGCCACGATATCAACCTGGTGCGCAGCTTCTGCGACCGGGTGCTGGTGATGTAC GCCGGACGGGTAGTGGAGTCCATCGCCGCTAAAGATCTCGATAACGCCCGTCACCCCTACACTCAGGGATTGATTAACTC GCTGCCGGATATGCAGCATCGTCGCCCGATACTGCCGGTGCTGCAGCGTCAGGCCAGCTGGTTAACGGATTAA
Upstream 100 bases:
>100_bases ATCTCCAGCGGGCGCACTTATATGATGGAGTGCTGGTGGGTCGTAACCATTCCGGGGCTGGCGATTTTGATCAATAGCTT AGCGTTCAACTTCTTAGGAG
Downstream 100 bases:
>100_bases GGAGCGGATAATGATTGAAGTTCAACATCTCAACCTCGCGTTTGGCGAGGGGGAGAAGCGTAACCAGGTGCTGTATGACG TCAGTTTCCACGTTAAGCCC
Product: putative dipeptide ABC transport system ATP-binding component
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MAYVTSSIPVVNNAPLLDVRDLCVDFVNGSAVTHAVRGVSFQLGHEKLAIVGESGSGKSTVGRALLQLHPKKARVSASRM QFADLDLQHLSEAQMRGVRGKRISMIMQDPKYSLNPVVCVGKQIAEAWLTHHPGRKDEAKARALEMLEVVRIRQPERVYQ LYPHEISGGQGQRIMIAMMLITDPELIIADEPTSALDVSVRLQVLGLLDDLVQSRGLGLIFISHDINLVRSFCDRVLVMY AGRVVESIAAKDLDNARHPYTQGLINSLPDMQHRRPILPVLQRQASWLTD
Sequences:
>Translated_290_residues MAYVTSSIPVVNNAPLLDVRDLCVDFVNGSAVTHAVRGVSFQLGHEKLAIVGESGSGKSTVGRALLQLHPKKARVSASRM QFADLDLQHLSEAQMRGVRGKRISMIMQDPKYSLNPVVCVGKQIAEAWLTHHPGRKDEAKARALEMLEVVRIRQPERVYQ LYPHEISGGQGQRIMIAMMLITDPELIIADEPTSALDVSVRLQVLGLLDDLVQSRGLGLIFISHDINLVRSFCDRVLVMY AGRVVESIAAKDLDNARHPYTQGLINSLPDMQHRRPILPVLQRQASWLTD >Mature_289_residues AYVTSSIPVVNNAPLLDVRDLCVDFVNGSAVTHAVRGVSFQLGHEKLAIVGESGSGKSTVGRALLQLHPKKARVSASRMQ FADLDLQHLSEAQMRGVRGKRISMIMQDPKYSLNPVVCVGKQIAEAWLTHHPGRKDEAKARALEMLEVVRIRQPERVYQL YPHEISGGQGQRIMIAMMLITDPELIIADEPTSALDVSVRLQVLGLLDDLVQSRGLGLIFISHDINLVRSFCDRVLVMYA GRVVESIAAKDLDNARHPYTQGLINSLPDMQHRRPILPVLQRQASWLTD
Specific function: Probably part of a binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for energy coupling to the transport system [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1789963, Length=258, Percent_Identity=43.7984496124031, Blast_Score=204, Evalue=5e-54, Organism=Escherichia coli, GI48994883, Length=269, Percent_Identity=41.635687732342, Blast_Score=202, Evalue=2e-53, Organism=Escherichia coli, GI1788506, Length=258, Percent_Identity=44.1860465116279, Blast_Score=199, Evalue=1e-52, Organism=Escherichia coli, GI1787759, Length=278, Percent_Identity=40.2877697841727, Blast_Score=196, Evalue=1e-51, Organism=Escherichia coli, GI145693107, Length=264, Percent_Identity=42.0454545454545, Blast_Score=194, Evalue=4e-51, Organism=Escherichia coli, GI1787548, Length=266, Percent_Identity=37.218045112782, Blast_Score=181, Evalue=6e-47, Organism=Escherichia coli, GI1789962, Length=242, Percent_Identity=45.4545454545455, Blast_Score=174, Evalue=5e-45, Organism=Escherichia coli, GI1787500, Length=256, Percent_Identity=40.625, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1787758, Length=266, Percent_Identity=38.7218045112782, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI48994997, Length=259, Percent_Identity=35.9073359073359, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1789890, Length=234, Percent_Identity=35.4700854700855, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI1787547, Length=265, Percent_Identity=32.8301886792453, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1789891, Length=203, Percent_Identity=36.9458128078818, Blast_Score=111, Evalue=7e-26, Organism=Escherichia coli, GI1788225, Length=255, Percent_Identity=30.9803921568627, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87081834, Length=242, Percent_Identity=33.4710743801653, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1786398, Length=244, Percent_Identity=30.327868852459, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789672, Length=220, Percent_Identity=31.3636363636364, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787089, Length=224, Percent_Identity=30.3571428571429, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787370, Length=224, Percent_Identity=27.6785714285714, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787712, Length=250, Percent_Identity=30.4, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1789032, Length=203, Percent_Identity=33.0049261083744, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787029, Length=201, Percent_Identity=30.3482587064677, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI87081791, Length=250, Percent_Identity=29.2, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786872, Length=196, Percent_Identity=29.5918367346939, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787105, Length=234, Percent_Identity=29.4871794871795, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1786345, Length=238, Percent_Identity=27.7310924369748, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1788761, Length=228, Percent_Identity=27.6315789473684, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1789991, Length=223, Percent_Identity=27.8026905829596, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788644, Length=180, Percent_Identity=31.6666666666667, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786803, Length=216, Percent_Identity=28.2407407407407, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790467, Length=259, Percent_Identity=27.027027027027, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789873, Length=211, Percent_Identity=28.9099526066351, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87081709, Length=227, Percent_Identity=27.3127753303965, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1786319, Length=224, Percent_Identity=27.6785714285714, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790544, Length=245, Percent_Identity=26.9387755102041, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87082267, Length=205, Percent_Identity=29.2682926829268, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994943, Length=246, Percent_Identity=28.0487804878049, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786703, Length=202, Percent_Identity=29.2079207920792, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790739, Length=212, Percent_Identity=27.8301886792453, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1790525, Length=227, Percent_Identity=28.1938325991189, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1788450, Length=208, Percent_Identity=26.9230769230769, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787164, Length=198, Percent_Identity=29.7979797979798, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787112, Length=255, Percent_Identity=25.8823529411765, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1786253, Length=199, Percent_Identity=28.643216080402, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787792, Length=235, Percent_Identity=25.9574468085106, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1788472, Length=99, Percent_Identity=32.3232323232323, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1790534, Length=200, Percent_Identity=28.5, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI25146777, Length=230, Percent_Identity=29.1304347826087, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193209708, Length=219, Percent_Identity=31.9634703196347, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193202349, Length=222, Percent_Identity=29.2792792792793, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17558664, Length=211, Percent_Identity=30.3317535545024, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71996809, Length=222, Percent_Identity=29.2792792792793, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193211015, Length=222, Percent_Identity=29.2792792792793, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115534520, Length=221, Percent_Identity=28.5067873303167, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193211017, Length=222, Percent_Identity=29.2792792792793, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI212646699, Length=215, Percent_Identity=29.3023255813954, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI115533592, Length=196, Percent_Identity=29.0816326530612, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI193208177, Length=222, Percent_Identity=29.7297297297297, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17565938, Length=207, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17567269, Length=212, Percent_Identity=26.8867924528302, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17541710, Length=224, Percent_Identity=25.4464285714286, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115535101, Length=219, Percent_Identity=29.2237442922374, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=246, Percent_Identity=26.8292682926829, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323217, Length=218, Percent_Identity=27.9816513761468, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641565, Length=244, Percent_Identity=29.5081967213115, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI85726357, Length=224, Percent_Identity=30.3571428571429, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI17136662, Length=221, Percent_Identity=30.316742081448, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI23397593, Length=214, Percent_Identity=28.9719626168224, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 32177; Mature: 32046
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYVTSSIPVVNNAPLLDVRDLCVDFVNGSAVTHAVRGVSFQLGHEKLAIVGESGSGKST CCEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCEEEECCCEEEEEECCCCCHHH VGRALLQLHPKKARVSASRMQFADLDLQHLSEAQMRGVRGKRISMIMQDPKYSLNPVVCV HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHH GKQIAEAWLTHHPGRKDEAKARALEMLEVVRIRQPERVYQLYPHEISGGQGQRIMIAMML HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEE ITDPELIIADEPTSALDVSVRLQVLGLLDDLVQSRGLGLIFISHDINLVRSFCDRVLVMY ECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH AGRVVESIAAKDLDNARHPYTQGLINSLPDMQHRRPILPVLQRQASWLTD HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure AYVTSSIPVVNNAPLLDVRDLCVDFVNGSAVTHAVRGVSFQLGHEKLAIVGESGSGKST CEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCEEEECCCEEEEEECCCCCHHH VGRALLQLHPKKARVSASRMQFADLDLQHLSEAQMRGVRGKRISMIMQDPKYSLNPVVCV HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHH GKQIAEAWLTHHPGRKDEAKARALEMLEVVRIRQPERVYQLYPHEISGGQGQRIMIAMML HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEE ITDPELIIADEPTSALDVSVRLQVLGLLDDLVQSRGLGLIFISHDINLVRSFCDRVLVMY ECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH AGRVVESIAAKDLDNARHPYTQGLINSLPDMQHRRPILPVLQRQASWLTD HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]