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The map label for this gene is ybcY [H]

Identifier: 238895540

GI number: 238895540

Start: 3446958

End: 3447611

Strand: Direct

Name: ybcY [H]

Synonym: KP1_3621

Alternate gene names: 238895540

Gene position: 3446958-3447611 (Clockwise)

Preceding gene: 238895539

Following gene: 238895543

Centisome position: 65.67

GC content: 35.47

Gene sequence:

>654_bases
ATGAGTAATACTGATAACGGGACGAAGATCTACACTCCATTAACTCTGAAACTATATGACTGGTGGGTGCTTTGCATTTC
GAATAGTTACGCATGGAATTGTTCAACAAAGGATATTTTAATTCCTTATTTTTTACAAAACTTAAGCCCTAACCACCTAG
ATATTGGCGTTGGTACTGGCTATTATCTCACTAAAATCCCTGCTCACTATAATATATCCCTCATGGATCTTAACCCTGCT
AGCTTAAAAGCTGCATCGGCCAGAGTAGGGGAAGATAGAATACACTATAAAGTTAGGCATGATGTATTTGAATCTTACCC
AGAGGAACTTCATGGAAAATTTGATTCCATATCAATGTATTACCTCATCCATTGTCTACCAGGAACAATGGAAGATAAAA
GAATTGTCATAAAAAACGCGAAGACCGCCTTAACTAAAGGTGGGATACTTTACGGAGCAACCATACTTGGTGATAAGGTA
AGGCATAATAGTTTCGCGTTAAAATTGTTGCAAATTTATAACCAAAAAGGTATTTTTTCTAATTTTAGTGATTCTGAAGA
AGAACTAAAAAAGATGCTTTCTCATTATTTTGAAAATATTAATGTCGTTGTGAAAGGTGCTGTTGCAATGTTCTCTGCGC
ATGGAAAAAAATAG

Upstream 100 bases:

>100_bases
CAGACTAAATACTCTCAAAGTAAATTGATATATTGTTCTCCTTGATATCAGGCCCATTTTTTGATTTAATTTCCAATGTT
AACTGTATAAGGTGCAATCA

Downstream 100 bases:

>100_bases
TTATTTATCATTTTTTTCTGGTTTTATTTCTTTAAAAAAACACCTTATGAACTGATCCTATAATGTTGGATAGTTTATAT
TAAGCGGCTAATAAGGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSNTDNGTKIYTPLTLKLYDWWVLCISNSYAWNCSTKDILIPYFLQNLSPNHLDIGVGTGYYLTKIPAHYNISLMDLNPA
SLKAASARVGEDRIHYKVRHDVFESYPEELHGKFDSISMYYLIHCLPGTMEDKRIVIKNAKTALTKGGILYGATILGDKV
RHNSFALKLLQIYNQKGIFSNFSDSEEELKKMLSHYFENINVVVKGAVAMFSAHGKK

Sequences:

>Translated_217_residues
MSNTDNGTKIYTPLTLKLYDWWVLCISNSYAWNCSTKDILIPYFLQNLSPNHLDIGVGTGYYLTKIPAHYNISLMDLNPA
SLKAASARVGEDRIHYKVRHDVFESYPEELHGKFDSISMYYLIHCLPGTMEDKRIVIKNAKTALTKGGILYGATILGDKV
RHNSFALKLLQIYNQKGIFSNFSDSEEELKKMLSHYFENINVVVKGAVAMFSAHGKK
>Mature_216_residues
SNTDNGTKIYTPLTLKLYDWWVLCISNSYAWNCSTKDILIPYFLQNLSPNHLDIGVGTGYYLTKIPAHYNISLMDLNPAS
LKAASARVGEDRIHYKVRHDVFESYPEELHGKFDSISMYYLIHCLPGTMEDKRIVIKNAKTALTKGGILYGATILGDKVR
HNSFALKLLQIYNQKGIFSNFSDSEEELKKMLSHYFENINVVVKGAVAMFSAHGKK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR016584 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 24608; Mature: 24476

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTDNGTKIYTPLTLKLYDWWVLCISNSYAWNCSTKDILIPYFLQNLSPNHLDIGVGTG
CCCCCCCCEEEEEEEEEEEEEEEEEECCCEEECCCCCCEEHHHHHHCCCCCEEEEECCCC
YYLTKIPAHYNISLMDLNPASLKAASARVGEDRIHYKVRHDVFESYPEELHGKFDSISMY
EEEEECCCCEEEEEEECCHHHHHHHHHHCCCCHHEEHHHHHHHHHCCHHHCCCCCCEEEE
YLIHCLPGTMEDKRIVIKNAKTALTKGGILYGATILGDKVRHNSFALKLLQIYNQKGIFS
EEEEECCCCCCCCEEEEECCCHHHHCCCEEEEHHHHCCCHHCHHHHHHHHHHHCCCCCCC
NFSDSEEELKKMLSHYFENINVVVKGAVAMFSAHGKK
CCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCC
>Mature Secondary Structure 
SNTDNGTKIYTPLTLKLYDWWVLCISNSYAWNCSTKDILIPYFLQNLSPNHLDIGVGTG
CCCCCCCEEEEEEEEEEEEEEEEEECCCEEECCCCCCEEHHHHHHCCCCCEEEEECCCC
YYLTKIPAHYNISLMDLNPASLKAASARVGEDRIHYKVRHDVFESYPEELHGKFDSISMY
EEEEECCCCEEEEEEECCHHHHHHHHHHCCCCHHEEHHHHHHHHHCCHHHCCCCCCEEEE
YLIHCLPGTMEDKRIVIKNAKTALTKGGILYGATILGDKVRHNSFALKLLQIYNQKGIFS
EEEEECCCCCCCCEEEEECCCHHHHCCCEEEEHHHHCCCHHCHHHHHHHHHHHCCCCCCC
NFSDSEEELKKMLSHYFENINVVVKGAVAMFSAHGKK
CCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]