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The map label for this gene is vagC [H]

Identifier: 238895528

GI number: 238895528

Start: 3432509

End: 3432739

Strand: Direct

Name: vagC [H]

Synonym: KP1_3605

Alternate gene names: 238895528

Gene position: 3432509-3432739 (Clockwise)

Preceding gene: 238895522

Following gene: 238895529

Centisome position: 65.4

GC content: 59.74

Gene sequence:

>231_bases
ATGCGCACAGTTTCGATATTTAAAAACGGCAATAACCGCGCCATCCGTCTGCCCCGGGACCTGGATTTTGACGGCGTCAG
CGAGCTGGAGATCGTCCGGGAAGGGGACAGCATCATTCTGCGTCCCGTCCGGCCGACCTGGGGCTCGTTCGCGCAGCTGG
ACAGGGCCGATCCGGACTTTATGGTGGAGCGTGAGGATGTGGTCAGCGATGAAGGACGCTTTGAGCCATGA

Upstream 100 bases:

>100_bases
CCAGTCATATGCATATGTGACACCTATACAAACCAGTCCGGCAGGCATATACTGCACATATGCACTCACACATCATGCAT
GATCAGCCGGAGGAAAATCC

Downstream 100 bases:

>100_bases
AGAAAACCTGGATGCTCGACACTAACATCTGCTCGTTCATCATGCGCGAGCAGCCGGCAGCGGTGCTGAAGCGCCTGGAG
CAGGCGGGGCTGCGCGGTGA

Product: virulence-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MRTVSIFKNGNNRAIRLPRDLDFDGVSELEIVREGDSIILRPVRPTWGSFAQLDRADPDFMVEREDVVSDEGRFEP

Sequences:

>Translated_76_residues
MRTVSIFKNGNNRAIRLPRDLDFDGVSELEIVREGDSIILRPVRPTWGSFAQLDRADPDFMVEREDVVSDEGRFEP
>Mature_76_residues
MRTVSIFKNGNNRAIRLPRDLDFDGVSELEIVREGDSIILRPVRPTWGSFAQLDRADPDFMVEREDVVSDEGRFEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the vapB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 8750; Mature: 8750

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVSIFKNGNNRAIRLPRDLDFDGVSELEIVREGDSIILRPVRPTWGSFAQLDRADPDF
CCEEEEEECCCCCEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCE
MVEREDVVSDEGRFEP
EEECCCCCCCCCCCCC
>Mature Secondary Structure
MRTVSIFKNGNNRAIRLPRDLDFDGVSELEIVREGDSIILRPVRPTWGSFAQLDRADPDF
CCEEEEEECCCCCEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCE
MVEREDVVSDEGRFEP
EEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1495391 [H]