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The map label for this gene is int [H]

Identifier: 238895507

GI number: 238895507

Start: 3395997

End: 3397259

Strand: Direct

Name: int [H]

Synonym: KP1_3581

Alternate gene names: 238895507

Gene position: 3395997-3397259 (Clockwise)

Preceding gene: 238895505

Following gene: 238895512

Centisome position: 64.7

GC content: 52.57

Gene sequence:

>1263_bases
ATGTCCCTTACCGACGCAAAAATCCGCACCCTCAAGCCTTCTGATAAACCCTTTAAAGTCTCCGATTCTCACGGTCTGTA
TCTGCTGGTCAAGCCGGGTGGCTCCCGCCACTGGTATCTCAAATACCGTATTAGCGGTAAAGAATCCCGCATTGCGCTGG
GTGCCTATCCAGCCATCTCCCTGTCTGATGCGCGACAGCAACGTGAAGGTATCCGTAAAATGCTGGCGCTGAATATCAAC
CCGGTTCAGCAGCGGGCTGCTGAACGTGGCTCACGAACACCGGAGAAAGTTTTTAAAAACGTGGCGCTGGCGTGGCATAA
AAGTAACAGGAAATGGTCGCAGAACACCGCCGACCGTTTGCTTGCCAGCCTGAACAATCACATCTTTCCGGTCATCGGGA
ACCTACCTGTATCAGAACTTAAACCCCGTCATTTCATTGACCTGCTGAAAGGGATCGAGGAAAAAGGTCTGCTGGAAGTT
GCGTCCCGCACGCGGCAGCACCTGAGTAACATAATGCGCCATGCGGTCCATCAGGGGTTAATCGATACGAACCCGGCAGC
AAACCTTGGCGGCGTGACCACACCTCCTGTCAGAAGGCACTATCCTGCCCTGCCGCTGGAGCGACTACCTGAGCTGCTCG
AACGCATTGAAGGATATCATCAGGGCCGCGAACTTACCCGGCTTGCCGTCCTGCTGATGCTGCATGTGTTCATTCGCTCC
AGTGAACTGCGTTTCGCTCGCTGGTCAGAGATTGATTTCACAAACCGAGTCTGGACGATACCCGCGACGCGAGAACCCAT
TATTGGAGTGCGTTATTCCGAGCGCGGGGCCAAAATGCGAATGCCGCATATCGTCCCCCTTTCAGAACAGGCCATCGCCA
TTCTGAAACAGATTAAAGATATCACCGGTAATAATGAACTGGTCTTCCCCGGCGACCATAACCCGTATAAGCCAATGTGT
GAAAACACGGTCAATAAGGCACTGCGGGTGATGGGTTACGACACGAAAAAGGATATCTGCGGTCACGGCTTCCGGGCAAT
GGCATGCAGTGCGCTGATGGAATCGGGTTTATGGGCAAAGGACGCAGTAGAACGCCAGATGAGTCATCAGGAGCGCAATA
CCGTGCGCATGGCTTATATTCATAAGGCAGAGCACCTAGAAGCCCGCAAAGCGATGATGCAGTGGTGGTCGGATTATCTG
GAAGCATGCCGAGAATCTTATGCACCGCCTTATACAATTGGTAAAAATAAGTTTATCCCATAG

Upstream 100 bases:

>100_bases
GAAAACTCTTCTCGGTGCATTTTGATTTTACCCTACGCATCGGGAAAAATTGGTGGTCAAATCTGGGGTCAGGTTAGTTC
GATAATGGAGTGACCCCCAT

Downstream 100 bases:

>100_bases
TATACTAACGAATCCCACACTCTGGCAAATTACCACCACCTCCACAGGAGGTGGTTCTATATAGACTTTTATCAACTTCA
TGACGAAAAACACCTATTTT

Product: integrase

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSLTDAKIRTLKPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNIN
PVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHFIDLLKGIEEKGLLEV
ASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPALPLERLPELLERIEGYHQGRELTRLAVLLMLHVFIRS
SELRFARWSEIDFTNRVWTIPATREPIIGVRYSERGAKMRMPHIVPLSEQAIAILKQIKDITGNNELVFPGDHNPYKPMC
ENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYL
EACRESYAPPYTIGKNKFIP

Sequences:

>Translated_420_residues
MSLTDAKIRTLKPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNIN
PVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHFIDLLKGIEEKGLLEV
ASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPALPLERLPELLERIEGYHQGRELTRLAVLLMLHVFIRS
SELRFARWSEIDFTNRVWTIPATREPIIGVRYSERGAKMRMPHIVPLSEQAIAILKQIKDITGNNELVFPGDHNPYKPMC
ENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYL
EACRESYAPPYTIGKNKFIP
>Mature_419_residues
SLTDAKIRTLKPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINP
VQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHFIDLLKGIEEKGLLEVA
SRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPALPLERLPELLERIEGYHQGRELTRLAVLLMLHVFIRSS
ELRFARWSEIDFTNRVWTIPATREPIIGVRYSERGAKMRMPHIVPLSEQAIAILKQIKDITGNNELVFPGDHNPYKPMCE
NTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLE
ACRESYAPPYTIGKNKFIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1788974, Length=407, Percent_Identity=33.4152334152334, Blast_Score=238, Evalue=7e-64,
Organism=Escherichia coli, GI1788690, Length=401, Percent_Identity=30.9226932668329, Blast_Score=232, Evalue=4e-62,
Organism=Escherichia coli, GI145693166, Length=408, Percent_Identity=32.1078431372549, Blast_Score=195, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 48010; Mature: 47879

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTDAKIRTLKPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRISGKESRIALGAYPAIS
CCCCCCHHEEECCCCCCEEEECCCCEEEEEECCCCEEEEEEEEECCCCCEEEEECCCCCC
LSDARQQREGIRKMLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
LASLNNHIFPVIGNLPVSELKPRHFIDLLKGIEEKGLLEVASRTRQHLSNIMRHAVHQGL
HHHHCCCEEEEECCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
IDTNPAANLGGVTTPPVRRHYPALPLERLPELLERIEGYHQGRELTRLAVLLMLHVFIRS
CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
SELRFARWSEIDFTNRVWTIPATREPIIGVRYSERGAKMRMPHIVPLSEQAIAILKQIKD
CCCCEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
ITGNNELVFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAK
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCHH
DAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGKNKFIP
HHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC
>Mature Secondary Structure 
SLTDAKIRTLKPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRISGKESRIALGAYPAIS
CCCCCHHEEECCCCCCEEEECCCCEEEEEECCCCEEEEEEEEECCCCCEEEEECCCCCC
LSDARQQREGIRKMLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
LASLNNHIFPVIGNLPVSELKPRHFIDLLKGIEEKGLLEVASRTRQHLSNIMRHAVHQGL
HHHHCCCEEEEECCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
IDTNPAANLGGVTTPPVRRHYPALPLERLPELLERIEGYHQGRELTRLAVLLMLHVFIRS
CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
SELRFARWSEIDFTNRVWTIPATREPIIGVRYSERGAKMRMPHIVPLSEQAIAILKQIKD
CCCCEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
ITGNNELVFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAK
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCHH
DAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGKNKFIP
HHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]