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The map label for this gene is yecS [H]

Identifier: 238895476

GI number: 238895476

Start: 3362526

End: 3363194

Strand: Reverse

Name: yecS [H]

Synonym: KP1_3547

Alternate gene names: 238895476

Gene position: 3363194-3362526 (Counterclockwise)

Preceding gene: 238895477

Following gene: 238895475

Centisome position: 64.08

GC content: 57.85

Gene sequence:

>669_bases
ATGCAAGAAAGTATCCAACTGGTCATTGATTCCGCCCCTTTTCTGCTGAAAGGGGCCGTCTTTACGCTGCAGCTGAGCAT
TGGCGGGATGTTTTTCGGCCTGGTGCTGGGCTTTATCCTGGCGCTGATGCGCATGTCGCCAGTCTGGCCGGTAAAATGGC
TGGCGCGCATGTATATCTCCATTTTCCGCGGCACGCCGCTTATCGCCCAGCTGTTTATGATCTACTACGGCTTGCCGCAG
TTCGGCATTGAGCTTGACCCGATCCCGGCGGCGATGATCGGCCTGTCGTTGAATACTGCGGCCTATGCGGCGGAAACGCT
GCGCGCGGCCATCGCCTCGATTGATAAAGGGCAATGGGAAGCGGCGGCCAGTATCGGTATGACGCCCTGGCAGACGATGC
GTCGGGCCATTTTACCCCAGGCGGCGCGGGTCGCTTTGCCGCCGCTGTCGAACAGTTTTATCAGCCTGGTAAAAGATACC
TCGCTGGCGGCAACGATCCAGGTGCCGGAGCTGTTCCGTCAGGCGCAGCTAATCACCTCGCGAACCCTGGAGGTCTTCAC
TATGTATCTGGCGGCCTCCCTGATCTACTGGGTAATGGCGACAGTGCTCTCCTCGCTGCAGAATTATTTTGAAAACCAGC
TGAACCGCCAGGAGCGTGATCCGAAATGA

Upstream 100 bases:

>100_bases
GAAGCGCTTTAAGGATGAAGGGCCGATACTGTTCGTCCATACCGGCGGAGCGCCGGCGCTGTTTGCCTATCATCCTCACC
TCTAATACAGAAACGACAGC

Downstream 100 bases:

>100_bases
GTGCGATAGAAGTGAAAAGCCTGGTAAAAAAATTCCATGGCCAGACGGTGCTCCATGGTATCGACCTGGAGGTACAGAAA
GGGGAAGTGGTGGCGATCAT

Product: putative amino-acid ABC transport system permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPVKWLARMYISIFRGTPLIAQLFMIYYGLPQ
FGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDT
SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQERDPK

Sequences:

>Translated_222_residues
MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPVKWLARMYISIFRGTPLIAQLFMIYYGLPQ
FGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDT
SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQERDPK
>Mature_222_residues
MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPVKWLARMYISIFRGTPLIAQLFMIYYGLPQ
FGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDT
SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQERDPK

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=222, Percent_Identity=93.6936936936937, Blast_Score=423, Evalue=1e-120,
Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=37.0731707317073, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=36.9158878504673, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=34.1013824884793, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI87082239, Length=211, Percent_Identity=36.9668246445498, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI1787087, Length=232, Percent_Identity=30.6034482758621, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1788645, Length=199, Percent_Identity=35.1758793969849, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1788646, Length=210, Percent_Identity=29.5238095238095, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1786874, Length=188, Percent_Identity=32.4468085106383, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI48994930, Length=171, Percent_Identity=35.0877192982456, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24684; Mature: 24684

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPVKWLARMYIS
CCCCCEEEECCCCHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWE
HHCCCHHHHHHHHHHHCCCHHCCEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS
HHHHCCCCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCHHEEEHHHHHHHHHHHHHH
RTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQERDPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPVKWLARMYIS
CCCCCEEEECCCCHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWE
HHCCCHHHHHHHHHHHCCCHHCCEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS
HHHHCCCCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCHHEEEHHHHHHHHHHHHHH
RTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQERDPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]