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The map label for this gene is dapA4 [H]

Identifier: 238895469

GI number: 238895469

Start: 3355343

End: 3356224

Strand: Reverse

Name: dapA4 [H]

Synonym: KP1_3539

Alternate gene names: 238895469

Gene position: 3356224-3355343 (Counterclockwise)

Preceding gene: 238895470

Following gene: 238895468

Centisome position: 63.95

GC content: 60.32

Gene sequence:

>882_bases
ATGTTCAGTGGACTTTGCGCATTTCCTTTGACACCTTTGCATCAGCAAAAATTTGATGAAAAAGCGTTTATTCGTATTCT
CGCCCGTCTTACCGATGCCGGAGTCGACTCTCTGGGCATCTTAGGTTCAACCGGTAGCTACGCTTATCTCAGCCGTGAGC
AGCGCAGACGAGTGGTGCAGGTGGCGAAGGCGCATGCGGGGTCGATCCCGATGATGGTCGGCGTCGGCGCCATTGCGACT
AACGAGGTGCTACGCCTGGTGGAGGATGCTCAGGAGGCAGGGGCGGATGCGTTATTACTGCCGATGATGTCCTATCAGCC
GCTTTCCGCGGAGGAGATCTTTGCCTTTTACGAAGAAGTTTGCCGGCATGTCTCGGTGCCGGTTTGCCTGTATGACAATC
CCCGCACTACCCACGTAATGCTGGCGGATGAGCTGCAGGGGCGCATCGCCGCCTTGCCGGCCATTGCCTCGATTAAAATT
CCCGGCCTGCCCGCGCCACAGGCGAGCGAACGTGTTGCGGCCCTGCGTCAGCATCTTCCCTCTCGCGTTACGCTTGGCGT
CAGCGGCGATGCATGGACCACTGCCGGGTTGCAGGCCGGCTGCGAAGCCTGGTATTCGGTCTGCGGCGGACTCTTTCCCC
GCTGCTCACTGGCGCTGGTAAGAGCGATACGTAGCGGTGATGTGGCGCAGACTGCGGCACTGAATGAGCAGCTGGCCCCC
CTATGGCGATGCTTTGATCGCTATGGTGGTAGCCTGCGAGTGATAGCCAGCGCCGCAGCGATGCTCGGACTCTGCGATCC
AGACTCGCTTCCCCGTCCTTTGCTTTCGTTAGGGGAGGAGGCCTGTCGTGAGGTGGCGTCGGCGCTGCGCGGCCTGGCCT
GA

Upstream 100 bases:

>100_bases
TAACTCTGGCCTTACAGTCAATTTCTCATTTGTCCCAGGACAAAACGATCGCGCCTTGCTACTATCAAACGGACTCTCAG
CCCAGCCTGCCGGAGGCAGC

Downstream 100 bases:

>100_bases
TCGCGTATCGTTGACACCGGCGCAATAGGTATCGCCGGGTGGCTTTCTGTTGGCAATTCGGCTACTGTAGGCCCGATTTT
TACCATGCGAGCCTGTGAAT

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MFSGLCAFPLTPLHQQKFDEKAFIRILARLTDAGVDSLGILGSTGSYAYLSREQRRRVVQVAKAHAGSIPMMVGVGAIAT
NEVLRLVEDAQEAGADALLLPMMSYQPLSAEEIFAFYEEVCRHVSVPVCLYDNPRTTHVMLADELQGRIAALPAIASIKI
PGLPAPQASERVAALRQHLPSRVTLGVSGDAWTTAGLQAGCEAWYSVCGGLFPRCSLALVRAIRSGDVAQTAALNEQLAP
LWRCFDRYGGSLRVIASAAAMLGLCDPDSLPRPLLSLGEEACREVASALRGLA

Sequences:

>Translated_293_residues
MFSGLCAFPLTPLHQQKFDEKAFIRILARLTDAGVDSLGILGSTGSYAYLSREQRRRVVQVAKAHAGSIPMMVGVGAIAT
NEVLRLVEDAQEAGADALLLPMMSYQPLSAEEIFAFYEEVCRHVSVPVCLYDNPRTTHVMLADELQGRIAALPAIASIKI
PGLPAPQASERVAALRQHLPSRVTLGVSGDAWTTAGLQAGCEAWYSVCGGLFPRCSLALVRAIRSGDVAQTAALNEQLAP
LWRCFDRYGGSLRVIASAAAMLGLCDPDSLPRPLLSLGEEACREVASALRGLA
>Mature_293_residues
MFSGLCAFPLTPLHQQKFDEKAFIRILARLTDAGVDSLGILGSTGSYAYLSREQRRRVVQVAKAHAGSIPMMVGVGAIAT
NEVLRLVEDAQEAGADALLLPMMSYQPLSAEEIFAFYEEVCRHVSVPVCLYDNPRTTHVMLADELQGRIAALPAIASIKI
PGLPAPQASERVAALRQHLPSRVTLGVSGDAWTTAGLQAGCEAWYSVCGGLFPRCSLALVRAIRSGDVAQTAALNEQLAP
LWRCFDRYGGSLRVIASAAAMLGLCDPDSLPRPLLSLGEEACREVASALRGLA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=257, Percent_Identity=27.6264591439689, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI87082415, Length=289, Percent_Identity=27.3356401384083, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788823, Length=297, Percent_Identity=25.9259259259259, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1789620, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 31304; Mature: 31304

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSGLCAFPLTPLHQQKFDEKAFIRILARLTDAGVDSLGILGSTGSYAYLSREQRRRVVQ
CCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VAKAHAGSIPMMVGVGAIATNEVLRLVEDAQEAGADALLLPMMSYQPLSAEEIFAFYEEV
HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCHHHHHHHHHHH
CRHVSVPVCLYDNPRTTHVMLADELQGRIAALPAIASIKIPGLPAPQASERVAALRQHLP
HHHCCCCEEEECCCCCEEEEEHHHHCCHHHHCCHHHEEECCCCCCCCHHHHHHHHHHHCC
SRVTLGVSGDAWTTAGLQAGCEAWYSVCGGLFPRCSLALVRAIRSGDVAQTAALNEQLAP
CEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LWRCFDRYGGSLRVIASAAAMLGLCDPDSLPRPLLSLGEEACREVASALRGLA
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSGLCAFPLTPLHQQKFDEKAFIRILARLTDAGVDSLGILGSTGSYAYLSREQRRRVVQ
CCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VAKAHAGSIPMMVGVGAIATNEVLRLVEDAQEAGADALLLPMMSYQPLSAEEIFAFYEEV
HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCHHHHHHHHHHH
CRHVSVPVCLYDNPRTTHVMLADELQGRIAALPAIASIKIPGLPAPQASERVAALRQHLP
HHHCCCCEEEECCCCCEEEEEHHHHCCHHHHCCHHHEEECCCCCCCCHHHHHHHHHHHCC
SRVTLGVSGDAWTTAGLQAGCEAWYSVCGGLFPRCSLALVRAIRSGDVAQTAALNEQLAP
CEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LWRCFDRYGGSLRVIASAAAMLGLCDPDSLPRPLLSLGEEACREVASALRGLA
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA