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The map label for this gene is yesR [H]

Identifier: 238895451

GI number: 238895451

Start: 3336778

End: 3337917

Strand: Reverse

Name: yesR [H]

Synonym: KP1_3520

Alternate gene names: 238895451

Gene position: 3337917-3336778 (Counterclockwise)

Preceding gene: 238895452

Following gene: 238895449

Centisome position: 63.6

GC content: 58.16

Gene sequence:

>1140_bases
ATGAAAGTTTGGCCGGTCAAACATAGCCCATTACTGCGTCAGCCTGAGCGTTTTATCGCCCGCAGCGAACTGCAGGCGCT
GATCCGCAACGTGACGCAAAACCTGGTGAATATTAAGGATGAGAGCGGGCAATTTTTACTACGCCTGGATGACGGGCGCG
TGATCGATACCAAAGGCTGGGCCGGCTGGGAGTGGACCCACGGCGTTGGGCTGTACGGCATCTATCAGTATTACCAGCAA
ACCGGCGATATCGAGATGCGTGATATCATCGATCGCTGGTTTGCCGACCGCTTCGCCGAGGGGGCAACGACCAAAAACGT
CAATACTATGGCCCCGTTTCTGACCCTGGCTTACCGCTTTGAAGAGACCGGCCGTATGGCGTATCTGCCGTGGCTGGAGA
GCTGGGCGGAGTGGGCGATGCACGAGATGCCGCGCACCGAGCAGGGCGGTATGCAGCACATGACTCTGGCGGAGGAGAAC
CATCAGCAAATGTGGGATGACACGCTGATGATGACCGTGTTGCCGTTAGCCAAAATTGGCAAGCTGCTTAACCGCCCGCA
GTATGTGGAGGAGGCAACCTACCAGTTCCTGCTCCATGTGCAGAACCTGATGGACCGGGAGACCGGGCTGTGGTTTCACG
GCTGGAACTATGAGGGGCGGCATAACTTTGCCCGGGCGCGTTGGGCGCGGGGCAACAGCTGGCTCACCATGGTGATCCCG
GATTTTCTGGAACTGGTGGATCTCCCCGAGGGGAACGCGGTACGGCGCTATCTGATTACAGTCCTCGACGCACAGATTGC
CGCCTTAGCAGAATGCCAGGACGACAGCGGCCTGTGGCATACCTTGCTGGACGACCCGCACTCTTATCTTGAGGCCTCGG
CGACCGCCGGCTTTGCCTACGGCATTCTCAAAGCGGTGCGCAAGCGTTATGTCGGGCAGCACTACGCCGGGGTGGCTGAA
AAAGCGATTCGCGGAATTGTGCAGAATATTTCGCCGCAGGGGGAGCTGCTGCAGACCTCATTTGGCACCGGGATGGGGTC
AGACCTCGATTTTTATCGCCAGATCCCGCTTACCTCGATGCCCTACGGTCAGGCGATGGCGATCCTTTGTCTGACGGAGT
ATCTACGCAAGTACTTCTGA

Upstream 100 bases:

>100_bases
GGCAATAACAATATTGGCTATCTGAATCGTCATAAACCTGCTGCCCCGGCGCTCATTAAGGGCGGCGCTTTGAATTCGAC
ATATACCCGAGGTTAACAAC

Downstream 100 bases:

>100_bases
GCAGGGCGCCCCGCTGGCGAGGCGCCGAATAAAACTAACCCGGCTTTCGCCGGGTTGCTTGTTACATACGCTCGACGGTT
TCGATACCGAGGGTATCAAG

Product: putative cytoplasmic protein

Products: NA

Alternate protein names: URH [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKVWPVKHSPLLRQPERFIARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGWAGWEWTHGVGLYGIYQYYQQ
TGDIEMRDIIDRWFADRFAEGATTKNVNTMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEEN
HQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIP
DFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYVGQHYAGVAE
KAIRGIVQNISPQGELLQTSFGTGMGSDLDFYRQIPLTSMPYGQAMAILCLTEYLRKYF

Sequences:

>Translated_379_residues
MKVWPVKHSPLLRQPERFIARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGWAGWEWTHGVGLYGIYQYYQQ
TGDIEMRDIIDRWFADRFAEGATTKNVNTMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEEN
HQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIP
DFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYVGQHYAGVAE
KAIRGIVQNISPQGELLQTSFGTGMGSDLDFYRQIPLTSMPYGQAMAILCLTEYLRKYF
>Mature_379_residues
MKVWPVKHSPLLRQPERFIARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGWAGWEWTHGVGLYGIYQYYQQ
TGDIEMRDIIDRWFADRFAEGATTKNVNTMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEEN
HQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIP
DFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYVGQHYAGVAE
KAIRGIVQNISPQGELLQTSFGTGMGSDLDFYRQIPLTSMPYGQAMAILCLTEYLRKYF

Specific function: Catalyzes the hydrolysis of unsaturated rhamnogalacturonan disaccharide to yield unsaturated D- galacturonic acid and L-rhamnose. It cannot act on unsaturated glucuronyl hydrolase (UGL) substrates containing unsaturated D- glucuronic acid at the non-reduc

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 105 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010905 [H]

Pfam domain/function: PF07470 Glyco_hydro_88 [H]

EC number: NA

Molecular weight: Translated: 43817; Mature: 43817

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVWPVKHSPLLRQPERFIARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGW
CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCC
AGWEWTHGVGLYGIYQYYQQTGDIEMRDIIDRWFADRFAEGATTKNVNTMAPFLTLAYRF
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
EETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMWDDTLMMTVLPLAKIG
HHCCCEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIP
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHCCCCCEEEEHHH
DFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLWHTLLDDPHSYLEASATAGFAY
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHH
GILKAVRKRYVGQHYAGVAEKAIRGIVQNISPQGELLQTSFGTGMGSDLDFYRQIPLTSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCC
PYGQAMAILCLTEYLRKYF
CCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKVWPVKHSPLLRQPERFIARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGW
CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCC
AGWEWTHGVGLYGIYQYYQQTGDIEMRDIIDRWFADRFAEGATTKNVNTMAPFLTLAYRF
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
EETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMWDDTLMMTVLPLAKIG
HHCCCEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIP
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHCCCCCEEEEHHH
DFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLWHTLLDDPHSYLEASATAGFAY
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHH
GILKAVRKRYVGQHYAGVAEKAIRGIVQNISPQGELLQTSFGTGMGSDLDFYRQIPLTSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCC
PYGQAMAILCLTEYLRKYF
CCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]