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The map label for this gene is 238895328

Identifier: 238895328

GI number: 238895328

Start: 3213532

End: 3214872

Strand: Reverse

Name: 238895328

Synonym: KP1_3387

Alternate gene names: NA

Gene position: 3214872-3213532 (Counterclockwise)

Preceding gene: 238895329

Following gene: 238895327

Centisome position: 61.25

GC content: 64.06

Gene sequence:

>1341_bases
ATGAAGATTTTCCGCCCATTATGGCGCGACGGGGCTTTTCTGGTCCCGCAGCAGTTTCAGCAACAGGCCCGCTGGGACGC
GCACGTCGCCGATACGGTCTCCCGCATGGCTCTCGCCCACCCGTGGGGGGTATTGCGCGCGGAGTTTGACGCGAGCGCGC
TCACCCTTTCCCGGCTCAACGCTACCCGGCTGATCGTGCGTTTCGCCGACGGAACGCTGATTGACACCGAGCTGGCGGAT
ATTTTGCCACCGGTCCGCGATGTATCGGACGTGATGCAGGACAGCGTGGAGGTTCTGCTCGCTCTGCCGCTGCTCAGCGC
CAGCGGCGGCAATCTTGATGACGGCCAGGAGAGCGCCCGCCCGCGCCGCTGGCGCGCCGAGCAGGTGACCGTCCAGGAGC
TGGCCGGCCATGAACGCAGCGAGCTGGCCGTTCTGCGGCACGCGCTAACGCTGCGTCTCTCCACCGAGGAAAATGCAGCC
TTTCTCACCTGCCCGGTAGCGCGTCTGGTGCGCGACGCCCAGGGGCAGTGGATCGTTGACCCGGAATTCATCCCGCCGCT
GCTGTCGCTGGCGGCAAGCCCGACGCTGGTCAGCGAGCTGGGCGAGCTGTTACATCGCCTGCAGGCCCGACGCAGACGCC
TGATGGCCATGCGTCGTGAAAGCAATGCGCGGATGGCTGATTTTGCCGTGGCGGATGTTTCCCTGTTCTGGCTGCTCAAC
GCGCTGAACAGCGCTGAACCGGTGCTCAGCGAGCTGCATCAGGACCCTTCGCGCCATCCGGAGCTGCTCTATCGCGAACT
GGCCAGGCTGGCCGGCAGTCTGCTGACTTTCTCCCTTGAACATCATCTGGAAGCAATCCCCCGCTACCGGCATGCCTCGC
CAGAGCAGGTATTCCCGCCGCTGTTTGCCCTGCTGGATACGCTGCTCGAAGTCAGCCTGCCCTCAAGGGTGATCGCCATC
GCTCTGGAGCAGGGCGCCGACCGGGAGATCTGGCGGGGCAGGCTGCACGATGCGCGGCTGCGCGAGGGGGCGGATTTTTA
TCTGTCGGTGCGCTCTTCACTCCCCCCTCACCAGCTACAGAGCCGCTTTCCGCAGCTCTGTAAGGCGGGTAGCCATGATG
ATGTCGCCGAGGTCGTCAATATTGCCCTCAGCGGCATCGCGATCAAACCGCTGAGCCATGTGCCGGCGGCCATTCCGCTA
CGTCTGGAAAACCAATATTTCGCTCTGGATCTCTCCACCGACGCCGCCCGCGCGATGCTGGAGGCCGGCAACTGCACCTT
CTATACCCCGGAATCGCTTGGCGACGTGAAACTTGAACTCTTTGCGGTACTGCGCTCATGA

Upstream 100 bases:

>100_bases
AGGTAATAAATCCAGCCGAACACACGGCGGATGAGGGATATCCGTCCGGGCATTTGGTCCTGTCTGCAGACCAATGAAAG
CGAAAGGCACAGGAGGTGCA

Downstream 100 bases:

>100_bases
ATACCTCTGAAAGCGATCTGATCAACAAAACTTTTTACCCGGGCTGGCTGATGGTCAGCCAGTTACGCTGCGGCCAGCCG
GTGACGGATGGCGAGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Type VI Secretion System Core Protein; Conserved Protein; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKIFRPLWRDGAFLVPQQFQQQARWDAHVADTVSRMALAHPWGVLRAEFDASALTLSRLNATRLIVRFADGTLIDTELAD
ILPPVRDVSDVMQDSVEVLLALPLLSASGGNLDDGQESARPRRWRAEQVTVQELAGHERSELAVLRHALTLRLSTEENAA
FLTCPVARLVRDAQGQWIVDPEFIPPLLSLAASPTLVSELGELLHRLQARRRRLMAMRRESNARMADFAVADVSLFWLLN
ALNSAEPVLSELHQDPSRHPELLYRELARLAGSLLTFSLEHHLEAIPRYRHASPEQVFPPLFALLDTLLEVSLPSRVIAI
ALEQGADREIWRGRLHDARLREGADFYLSVRSSLPPHQLQSRFPQLCKAGSHDDVAEVVNIALSGIAIKPLSHVPAAIPL
RLENQYFALDLSTDAARAMLEAGNCTFYTPESLGDVKLELFAVLRS

Sequences:

>Translated_446_residues
MKIFRPLWRDGAFLVPQQFQQQARWDAHVADTVSRMALAHPWGVLRAEFDASALTLSRLNATRLIVRFADGTLIDTELAD
ILPPVRDVSDVMQDSVEVLLALPLLSASGGNLDDGQESARPRRWRAEQVTVQELAGHERSELAVLRHALTLRLSTEENAA
FLTCPVARLVRDAQGQWIVDPEFIPPLLSLAASPTLVSELGELLHRLQARRRRLMAMRRESNARMADFAVADVSLFWLLN
ALNSAEPVLSELHQDPSRHPELLYRELARLAGSLLTFSLEHHLEAIPRYRHASPEQVFPPLFALLDTLLEVSLPSRVIAI
ALEQGADREIWRGRLHDARLREGADFYLSVRSSLPPHQLQSRFPQLCKAGSHDDVAEVVNIALSGIAIKPLSHVPAAIPL
RLENQYFALDLSTDAARAMLEAGNCTFYTPESLGDVKLELFAVLRS
>Mature_446_residues
MKIFRPLWRDGAFLVPQQFQQQARWDAHVADTVSRMALAHPWGVLRAEFDASALTLSRLNATRLIVRFADGTLIDTELAD
ILPPVRDVSDVMQDSVEVLLALPLLSASGGNLDDGQESARPRRWRAEQVTVQELAGHERSELAVLRHALTLRLSTEENAA
FLTCPVARLVRDAQGQWIVDPEFIPPLLSLAASPTLVSELGELLHRLQARRRRLMAMRRESNARMADFAVADVSLFWLLN
ALNSAEPVLSELHQDPSRHPELLYRELARLAGSLLTFSLEHHLEAIPRYRHASPEQVFPPLFALLDTLLEVSLPSRVIAI
ALEQGADREIWRGRLHDARLREGADFYLSVRSSLPPHQLQSRFPQLCKAGSHDDVAEVVNIALSGIAIKPLSHVPAAIPL
RLENQYFALDLSTDAARAMLEAGNCTFYTPESLGDVKLELFAVLRS

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49785; Mature: 49785

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFRPLWRDGAFLVPQQFQQQARWDAHVADTVSRMALAHPWGVLRAEFDASALTLSRLN
CCCCCHHHCCCCEECCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHC
ATRLIVRFADGTLIDTELADILPPVRDVSDVMQDSVEVLLALPLLSASGGNLDDGQESAR
HHEEEEEECCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
PRRWRAEQVTVQELAGHERSELAVLRHALTLRLSTEENAAFLTCPVARLVRDAQGQWIVD
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCEEEECHHHHHHHHCCCCEEEC
PEFIPPLLSLAASPTLVSELGELLHRLQARRRRLMAMRRESNARMADFAVADVSLFWLLN
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ALNSAEPVLSELHQDPSRHPELLYRELARLAGSLLTFSLEHHLEAIPRYRHASPEQVFPP
HHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LFALLDTLLEVSLPSRVIAIALEQGADREIWRGRLHDARLREGADFYLSVRSSLPPHQLQ
HHHHHHHHHHHCCCHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
SRFPQLCKAGSHDDVAEVVNIALSGIAIKPLSHVPAAIPLRLENQYFALDLSTDAARAML
HHHHHHHCCCCCCCHHHHHHHHHHCEEECCHHHCCCCCEEEECCEEEEEECCCHHHHHHH
EAGNCTFYTPESLGDVKLELFAVLRS
HCCCEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKIFRPLWRDGAFLVPQQFQQQARWDAHVADTVSRMALAHPWGVLRAEFDASALTLSRLN
CCCCCHHHCCCCEECCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHC
ATRLIVRFADGTLIDTELADILPPVRDVSDVMQDSVEVLLALPLLSASGGNLDDGQESAR
HHEEEEEECCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
PRRWRAEQVTVQELAGHERSELAVLRHALTLRLSTEENAAFLTCPVARLVRDAQGQWIVD
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCEEEECHHHHHHHHCCCCEEEC
PEFIPPLLSLAASPTLVSELGELLHRLQARRRRLMAMRRESNARMADFAVADVSLFWLLN
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ALNSAEPVLSELHQDPSRHPELLYRELARLAGSLLTFSLEHHLEAIPRYRHASPEQVFPP
HHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LFALLDTLLEVSLPSRVIAIALEQGADREIWRGRLHDARLREGADFYLSVRSSLPPHQLQ
HHHHHHHHHHHCCCHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
SRFPQLCKAGSHDDVAEVVNIALSGIAIKPLSHVPAAIPLRLENQYFALDLSTDAARAML
HHHHHHHCCCCCCCHHHHHHHHHHCEEECCHHHCCCCCEEEECCEEEEEECCCHHHHHHH
EAGNCTFYTPESLGDVKLELFAVLRS
HCCCEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA