Click here to switch to the map view.

The map label for this gene is ychM [H]

Identifier: 238895300

GI number: 238895300

Start: 3183606

End: 3185285

Strand: Direct

Name: ychM [H]

Synonym: KP1_3356

Alternate gene names: 238895300

Gene position: 3183606-3185285 (Clockwise)

Preceding gene: 238895299

Following gene: 238895303

Centisome position: 60.66

GC content: 62.2

Gene sequence:

>1680_bases
GTGAACAGATTATTTTCCTCACATGTGATGCCTTTCCGCGCCCTCATCGACGCTTGTTGGAAAGAAAAGTACACCACCGC
CCGCTTCACGCGTGACCTGATCGCCGGGATCACCGTCGGGATCATTGCGATTCCGCTGGCGATGGCGCTGGCGATTGGCA
GCGGCGTGCCGCCGCAGTACGGCCTCTATACCTCAGCGGTGGCAGGGATTGTGATCGCCTTGACCGGCGGGTCACGCTTT
AGCGTTTCCGGTCCGACCGCCGCCTTTGTGGTGATCCTCTATCCGGTTTCCCAGCAGTTTGGTCTGGCGGGACTGCTGGT
GGCAACCCTGATGTCGGGGATCTTTTTAATCCTCTTTGGCCTGGCGCGCTTTGGCCGCCTGATCGAATATATCCCTCTGT
CAGTCACCCTCGGCTTCACCTCGGGGATCGGTATCACCATCGGCACCATGCAGATTAAAGATTTCCTCGGCCTGCAGATG
CCCCATGTGCCGGAGCATTATCTGCAGAAAGTGGCGGCGCTGGCGATGGCCCTACCGACCATTAACGTTGGCGATGCCGC
CATCGGCGTCGTTACTCTTGGCATTCTGATCCTCTGGCCGCGGCTGGGTATCCGCCTGCCGGGCCACCTCCCGGCGCTGC
TGGGCGGCTGCGCGGTCATGCTGGTGGTCAACTTGCTCGGCGGCGATGTCGCGACGATCGGCTCGCAGTTCCATTATCAG
CTGGCGGACGGCACTCAGGGCAATGGCATTCCGCAGCTGCTGCCGCAGCTGGTATTGCCCTGGGATATGCCGGGCTCAAA
CTTTACCCTGAGCTGGGCCTCGCTGCAGGCTCTGCTGCCTGCCGCCTTCTCAATGGCGATGCTCGGCGCCATTGAATCTC
TGCTGTGCGCGGTGGTGCTTGATGGCATGACCGGCACCAAGCACAAAGCCAATAGCGAGCTGATTGGCCAGGGGCTGGGC
AACATTGTCGCGCCGTTCTTCGGCGGGATCACTGCCACCGCGGCGATTGCCCGCTCGGCGGCGAACGTCCGCGCCGGCGC
CACATCGCCGGTTGCCGCCGTGATCCACGCCCTGCTGGTGATCCTGGCGCTGCTGATCCTCGCCCCACTGCTCTCCTGGC
TGCCGCTGTCGGCGATGGCCGCCCTGCTGCTGATGGTGGCATGGAATATGAGCGAGGCGCATAAAGTCATCAATCTGCTG
CGCCACGCGCCGAAGGACGACATCGTGGTGATGCTAATGTGCATGTCGCTAACGGTGCTGTTTGACATGGTGATCGCTAT
CAGCGTCGGGATCGTGCTGGCTTCGCTGTTGTTTATGCGCCGTATCGCACGCATGACTCATCTGGCGCCGGTCAACGTCG
AGGTGCCAGACGATGTGCTGGTGCTGCGGGTAATAGGGCCGCTGTTCTTTGCCGCCGCCGAAGGCTTGTTCAACGATCTG
GAGACCCGGATCGCTGGCAAGCGCATCGTGGTGCTGAAATGGGACGCGGTGCCGGTTCTCGACGCCGGTGGCCTGGATGC
CTTCCAGCGCTTTGTGAACAAGCTGCCGGAAGGCTGTGAATTGCGCGTATCTAACCTCGAGTTTCAGCCGCTACGCACGC
TAGCGCGCGCCGGCGTCAAGCCGCTGCCCGGACGCCTGAGCTTCTACCCCGATCGTCAGGCCGCGCTGGCTGACCTGTGA

Upstream 100 bases:

>100_bases
GCGGCGGGTTTTTTTGTCTCCGCACCTTATTTGTATGATCAATGCCTCCTTCACCTGCCATTTAGTTGACAGATGATGCG
CTCATGGATGAAACATTATT

Downstream 100 bases:

>100_bases
TCACCCGGCGGCAGGTCCCTGCGCCTGCTGCATCAAGGATCCGGTCGCCTGCTGCAGCCAGCTCAGCACCGCCGGCGTCA
TCCAGGTGCCCTTCATCAAA

Product: putative sulfate transporter YchM

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MNRLFSSHVMPFRALIDACWKEKYTTARFTRDLIAGITVGIIAIPLAMALAIGSGVPPQYGLYTSAVAGIVIALTGGSRF
SVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGIFLILFGLARFGRLIEYIPLSVTLGFTSGIGITIGTMQIKDFLGLQM
PHVPEHYLQKVAALAMALPTINVGDAAIGVVTLGILILWPRLGIRLPGHLPALLGGCAVMLVVNLLGGDVATIGSQFHYQ
LADGTQGNGIPQLLPQLVLPWDMPGSNFTLSWASLQALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELIGQGLG
NIVAPFFGGITATAAIARSAANVRAGATSPVAAVIHALLVILALLILAPLLSWLPLSAMAALLLMVAWNMSEAHKVINLL
RHAPKDDIVVMLMCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTHLAPVNVEVPDDVLVLRVIGPLFFAAAEGLFNDL
ETRIAGKRIVVLKWDAVPVLDAGGLDAFQRFVNKLPEGCELRVSNLEFQPLRTLARAGVKPLPGRLSFYPDRQAALADL

Sequences:

>Translated_559_residues
MNRLFSSHVMPFRALIDACWKEKYTTARFTRDLIAGITVGIIAIPLAMALAIGSGVPPQYGLYTSAVAGIVIALTGGSRF
SVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGIFLILFGLARFGRLIEYIPLSVTLGFTSGIGITIGTMQIKDFLGLQM
PHVPEHYLQKVAALAMALPTINVGDAAIGVVTLGILILWPRLGIRLPGHLPALLGGCAVMLVVNLLGGDVATIGSQFHYQ
LADGTQGNGIPQLLPQLVLPWDMPGSNFTLSWASLQALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELIGQGLG
NIVAPFFGGITATAAIARSAANVRAGATSPVAAVIHALLVILALLILAPLLSWLPLSAMAALLLMVAWNMSEAHKVINLL
RHAPKDDIVVMLMCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTHLAPVNVEVPDDVLVLRVIGPLFFAAAEGLFNDL
ETRIAGKRIVVLKWDAVPVLDAGGLDAFQRFVNKLPEGCELRVSNLEFQPLRTLARAGVKPLPGRLSFYPDRQAALADL
>Mature_559_residues
MNRLFSSHVMPFRALIDACWKEKYTTARFTRDLIAGITVGIIAIPLAMALAIGSGVPPQYGLYTSAVAGIVIALTGGSRF
SVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGIFLILFGLARFGRLIEYIPLSVTLGFTSGIGITIGTMQIKDFLGLQM
PHVPEHYLQKVAALAMALPTINVGDAAIGVVTLGILILWPRLGIRLPGHLPALLGGCAVMLVVNLLGGDVATIGSQFHYQ
LADGTQGNGIPQLLPQLVLPWDMPGSNFTLSWASLQALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELIGQGLG
NIVAPFFGGITATAAIARSAANVRAGATSPVAAVIHALLVILALLILAPLLSWLPLSAMAALLLMVAWNMSEAHKVINLL
RHAPKDDIVVMLMCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTHLAPVNVEVPDDVLVLRVIGPLFFAAAEGLFNDL
ETRIAGKRIVVLKWDAVPVLDAGGLDAFQRFVNKLPEGCELRVSNLEFQPLRTLARAGVKPLPGRLSFYPDRQAALADL

Specific function: Possible sulfate transporter [H]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=545, Percent_Identity=26.9724770642202, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI262206075, Length=545, Percent_Identity=26.9724770642202, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI262206069, Length=545, Percent_Identity=26.9724770642202, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI262206063, Length=545, Percent_Identity=26.9724770642202, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI4557535, Length=487, Percent_Identity=23.2032854209446, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI94721257, Length=482, Percent_Identity=23.0290456431535, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI94721259, Length=482, Percent_Identity=23.0290456431535, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI94721255, Length=482, Percent_Identity=23.0290456431535, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI94721253, Length=482, Percent_Identity=23.0290456431535, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI4505697, Length=533, Percent_Identity=22.7016885553471, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI39752683, Length=381, Percent_Identity=22.3097112860892, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI45827800, Length=381, Percent_Identity=22.3097112860892, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI45827802, Length=381, Percent_Identity=22.3097112860892, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI20336282, Length=499, Percent_Identity=21.6432865731463, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI16306483, Length=516, Percent_Identity=21.3178294573643, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI269784651, Length=371, Percent_Identity=23.4501347708895, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI47131207, Length=562, Percent_Identity=23.8434163701068, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI20336272, Length=562, Percent_Identity=23.8434163701068, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI16418413, Length=505, Percent_Identity=22.1782178217822, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI217272867, Length=505, Percent_Identity=22.1782178217822, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI100913030, Length=547, Percent_Identity=21.3893967093236, Blast_Score=70, Evalue=7e-12,
Organism=Escherichia coli, GI87081859, Length=559, Percent_Identity=89.2665474060823, Blast_Score=943, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17566848, Length=554, Percent_Identity=24.0072202166065, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI86565215, Length=492, Percent_Identity=24.7967479674797, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI86564196, Length=527, Percent_Identity=23.719165085389, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562578, Length=436, Percent_Identity=22.4770642201835, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323121, Length=457, Percent_Identity=23.8512035010941, Blast_Score=97, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6319771, Length=445, Percent_Identity=23.5955056179775, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6325260, Length=559, Percent_Identity=22.3613595706619, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI85815873, Length=503, Percent_Identity=25.844930417495, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI19922482, Length=496, Percent_Identity=25.2016129032258, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24649801, Length=440, Percent_Identity=26.8181818181818, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI21358633, Length=478, Percent_Identity=25.5230125523013, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24663084, Length=532, Percent_Identity=25.5639097744361, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI21357695, Length=532, Percent_Identity=25.5639097744361, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24651449, Length=449, Percent_Identity=24.7216035634744, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI21358229, Length=472, Percent_Identity=25.4237288135593, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21355087, Length=178, Percent_Identity=26.9662921348315, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24647160, Length=178, Percent_Identity=26.9662921348315, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24666186, Length=441, Percent_Identity=24.2630385487528, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 59248; Mature: 59248

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50801 STAS ; PS01130 SLC26A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLFSSHVMPFRALIDACWKEKYTTARFTRDLIAGITVGIIAIPLAMALAIGSGVPPQY
CCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GLYTSAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGIFLILFG
CHHHHHHHCEEEEEECCCEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LARFGRLIEYIPLSVTLGFTSGIGITIGTMQIKDFLGLQMPHVPEHYLQKVAALAMALPT
HHHHHHHHHHHCCEEEEECCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
INVGDAAIGVVTLGILILWPRLGIRLPGHLPALLGGCAVMLVVNLLGGDVATIGSQFHYQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEE
LADGTQGNGIPQLLPQLVLPWDMPGSNFTLSWASLQALLPAAFSMAMLGAIESLLCAVVL
ECCCCCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGMTGTKHKANSELIGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPVAAVIHALLV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILALLILAPLLSWLPLSAMAALLLMVAWNMSEAHKVINLLRHAPKDDIVVMLMCMSLTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FDMVIAISVGIVLASLLFMRRIARMTHLAPVNVEVPDDVLVLRVIGPLFFAAAEGLFNDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH
ETRIAGKRIVVLKWDAVPVLDAGGLDAFQRFVNKLPEGCELRVSNLEFQPLRTLARAGVK
HHHHCCCEEEEEEECCCCEECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCC
PLPGRLSFYPDRQAALADL
CCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MNRLFSSHVMPFRALIDACWKEKYTTARFTRDLIAGITVGIIAIPLAMALAIGSGVPPQY
CCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GLYTSAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGIFLILFG
CHHHHHHHCEEEEEECCCEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LARFGRLIEYIPLSVTLGFTSGIGITIGTMQIKDFLGLQMPHVPEHYLQKVAALAMALPT
HHHHHHHHHHHCCEEEEECCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
INVGDAAIGVVTLGILILWPRLGIRLPGHLPALLGGCAVMLVVNLLGGDVATIGSQFHYQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEE
LADGTQGNGIPQLLPQLVLPWDMPGSNFTLSWASLQALLPAAFSMAMLGAIESLLCAVVL
ECCCCCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGMTGTKHKANSELIGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPVAAVIHALLV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILALLILAPLLSWLPLSAMAALLLMVAWNMSEAHKVINLLRHAPKDDIVVMLMCMSLTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FDMVIAISVGIVLASLLFMRRIARMTHLAPVNVEVPDDVLVLRVIGPLFFAAAEGLFNDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH
ETRIAGKRIVVLKWDAVPVLDAGGLDAFQRFVNKLPEGCELRVSNLEFQPLRTLARAGVK
HHHHCCCEEEEEEECCCCEECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCC
PLPGRLSFYPDRQAALADL
CCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]