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The map label for this gene is chaC [H]

Identifier: 238895288

GI number: 238895288

Start: 3172791

End: 3173471

Strand: Reverse

Name: chaC [H]

Synonym: KP1_3341

Alternate gene names: 238895288

Gene position: 3173471-3172791 (Counterclockwise)

Preceding gene: 238895289

Following gene: 238895287

Centisome position: 60.46

GC content: 63.29

Gene sequence:

>681_bases
GTGTTAACTCGTGATTTCTTAATGAATGCGGATTGTAAGACAGCGTTTGGCGCTATTGAGGAATCGCTACTCTGGTCGGC
AGAACAACGTGCAGCCTCGCTGGCGGCGACGCTGGCCTGCCGCCCGGATGATGGCTCAGTATGGATCTTTGGCTACGGTT
CGCTTATCTGGAACCCGGCGCTCAATTATCGCGAGTCCTGCACCGGCACGCTGCCGGGCTGGCACCGCGCGTTTTGCCTG
CGGTTGACCGCCGGGCGCGGTAGTGCCTGCCAGCCGGGACGCATGCTGGCTCTCAAAGAGGGCGGCCGAACCACCGGCGT
CGCCTATCGTCTGCCTGACGACACGCTGGAGGAGGAGCTGACCCTGCTGTGGAAGCGGGAGATGATCACCGGCTGCTATC
TGCCCACCTGGTGCAAGCTGGAGCTGGACGACGGACGGACGGTGAATGCCCTGGTGTTTATTATGGATCCGCGCCATCCA
CTGTTTGAACCGGATACCAGTGCCCAGGTTATCGCCCCGCTGATCGCCCGGGCCAGCGGGCCGCTCGGCACCAACGCCCA
GTATCTGTTTTCGCTTGAGCAGGCGCTGCGCAAGCTGGGCATGCACGATGCCAGTCTCGATGACCTGGTGGCCAGCGTCC
GCGCGCTGTTGGGCGAGAGTCCGACGCCGGGCCTGGCCTGA

Upstream 100 bases:

>100_bases
TGATTGCTTATTGAAAGATAAAGCTGGATAATATTTCAGCAATATTGACGGATGCATGAGACGAACGCCGGGAAGCGGGC
AGTGGCGGAGGTAGTAAACA

Downstream 100 bases:

>100_bases
GCGCGCGCAAAAGAAAACGCCCGGCATGACCGGGCGTCCGATTGCTGACCAGTAAGGAAAAAGCGTGGTTTTTCCTTACT
GGTGGTTATCAGCCGAAAAT

Product: cation transport regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLTRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDDGSVWIFGYGSLIWNPALNYRESCTGTLPGWHRAFCL
RLTAGRGSACQPGRMLALKEGGRTTGVAYRLPDDTLEEELTLLWKREMITGCYLPTWCKLELDDGRTVNALVFIMDPRHP
LFEPDTSAQVIAPLIARASGPLGTNAQYLFSLEQALRKLGMHDASLDDLVASVRALLGESPTPGLA

Sequences:

>Translated_226_residues
MLTRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDDGSVWIFGYGSLIWNPALNYRESCTGTLPGWHRAFCL
RLTAGRGSACQPGRMLALKEGGRTTGVAYRLPDDTLEEELTLLWKREMITGCYLPTWCKLELDDGRTVNALVFIMDPRHP
LFEPDTSAQVIAPLIARASGPLGTNAQYLFSLEQALRKLGMHDASLDDLVASVRALLGESPTPGLA
>Mature_226_residues
MLTRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDDGSVWIFGYGSLIWNPALNYRESCTGTLPGWHRAFCL
RLTAGRGSACQPGRMLALKEGGRTTGVAYRLPDDTLEEELTLLWKREMITGCYLPTWCKLELDDGRTVNALVFIMDPRHP
LFEPDTSAQVIAPLIARASGPLGTNAQYLFSLEQALRKLGMHDASLDDLVASVRALLGESPTPGLA

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI218563698, Length=181, Percent_Identity=32.0441988950276, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI56790287, Length=177, Percent_Identity=33.8983050847458, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI145693119, Length=225, Percent_Identity=83.5555555555556, Blast_Score=389, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI17560078, Length=174, Percent_Identity=31.0344827586207, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI45553467, Length=199, Percent_Identity=32.1608040201005, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24649389, Length=199, Percent_Identity=32.1608040201005, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24649391, Length=199, Percent_Identity=32.1608040201005, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24649393, Length=199, Percent_Identity=32.1608040201005, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24641578, Length=185, Percent_Identity=31.3513513513514, Blast_Score=74, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 24706; Mature: 24706

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDDGSVWIFGYGSLIWNPA
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCEEECCC
LNYRESCTGTLPGWHRAFCLRLTAGRGSACQPGRMLALKEGGRTTGVAYRLPDDTLEEEL
CCCHHCCCCCCCCHHEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEECCCHHHHHHH
TLLWKREMITGCYLPTWCKLELDDGRTVNALVFIMDPRHPLFEPDTSAQVIAPLIARASG
HHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCC
PLGTNAQYLFSLEQALRKLGMHDASLDDLVASVRALLGESPTPGLA
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLTRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDDGSVWIFGYGSLIWNPA
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCEEECCC
LNYRESCTGTLPGWHRAFCLRLTAGRGSACQPGRMLALKEGGRTTGVAYRLPDDTLEEEL
CCCHHCCCCCCCCHHEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEECCCHHHHHHH
TLLWKREMITGCYLPTWCKLELDDGRTVNALVFIMDPRHPLFEPDTSAQVIAPLIARASG
HHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCC
PLGTNAQYLFSLEQALRKLGMHDASLDDLVASVRALLGESPTPGLA
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]