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The map label for this gene is ychK [H]

Identifier: 238895265

GI number: 238895265

Start: 3142907

End: 3143809

Strand: Reverse

Name: ychK [H]

Synonym: KP1_3317

Alternate gene names: 238895265

Gene position: 3143809-3142907 (Counterclockwise)

Preceding gene: 238895268

Following gene: 238895264

Centisome position: 59.9

GC content: 56.48

Gene sequence:

>903_bases
ATGAGAAAGCTTAAAATTGGTCTGGCGCTAGGTGCGGGAGCAGCTCGCGGATGGTCGCACATTGGCGTCATCAACGCCCT
CCAGCGGGCCGGTATTGAGATTGATATCGTAGCCGGTTGTTCTATCGGTTCGCTGGTAGGGGCGGCGTATGCCTGTAACC
GACTCCCGGCACTCGAATCATGGGTCTGCTCATTCAGCAACTGGGATGTCCTGAAGCTGATGGATCTCTCCTGGCGCAGG
GGGGGACTGCTGCTGGGGGAAAAGGTATTCAATCATTACCGCCGCATTATGCCCGTCACCGAGATTGAACGCTGCGAGCG
CCGGTTTGCTGCTGTTGCCACCAATTTAAGCACCGGTAGGGAGCTGTGGTTTACCGAAGGCGATCTACATTTAGCCATTC
GCGCCTCCTGCAGTATGCCGGGGTTAATGTCGCCAGTAAGGCATAATGGTTACTGGCTGGTCGATGGCGCGGTGGTCAAT
CCGGTTCCTGTGTCGCTCACCCGGGCAATGGGAGCGGATATTGTGATTGCCGTCGACCTGCAACATGATGCCCATCTTAT
GCAGCAGGATTTGTTCTCCCTTGAAACGCCGCGGCAGGAAGCGGAAGAGAAGGAGGGGCCATGGCATACTCGTCTGCGCG
CGCGCTTGACGCGAATGAGTTCCCGCCGTACGGCCGTGACGCCGACGGCGATGGAGATCATGACCACCTCTATCCAGGTA
CTGGAAAACCGTCTTAAACGCAATCGTATGGCGGGTGACCCGCCGGATATCCTGTTGCAGCCATACTGTCCGCAAGTTTC
GACGCTTGATTTTCATCGCGCCGGAGAGGCGATCGCCGCGGGGCAACTGGCGGTAGAAAAGAAAATGGATGAATTATTAC
CATTAGTGCGTACAGCCGTTTGA

Upstream 100 bases:

>100_bases
GGAAGAAAGAGTAACGGCGCTTCTACGCCAAAGGGCATTATGTTAACTGAGCCGTGACAATGTTGCCACGCTCAGAGTGG
AAGGATAGTTATTAGTACTA

Downstream 100 bases:

>100_bases
CGTACGAGTTACTGACTTAAGCAAATTCTGACAGGCGATAGTGAGAATAGCGTGCCACTATTGAATTATCGTCAGCCAGG
GGAGATATCATGACGCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALESWVCSFSNWDVLKLMDLSWRR
GGLLLGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGRELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVN
PVPVSLTRAMGADIVIAVDLQHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQV
LENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV

Sequences:

>Translated_300_residues
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALESWVCSFSNWDVLKLMDLSWRR
GGLLLGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGRELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVN
PVPVSLTRAMGADIVIAVDLQHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQV
LENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV
>Mature_300_residues
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALESWVCSFSNWDVLKLMDLSWRR
GGLLLGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGRELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVN
PVPVSLTRAMGADIVIAVDLQHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQV
LENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=183, Percent_Identity=33.879781420765, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI116256487, Length=183, Percent_Identity=33.879781420765, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI260656037, Length=183, Percent_Identity=33.879781420765, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI260656043, Length=183, Percent_Identity=33.879781420765, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI260656039, Length=183, Percent_Identity=33.879781420765, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI148727335, Length=182, Percent_Identity=31.3186813186813, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI148727290, Length=182, Percent_Identity=31.3186813186813, Blast_Score=93, Evalue=4e-19,
Organism=Escherichia coli, GI226510936, Length=301, Percent_Identity=80.0664451827243, Blast_Score=506, Evalue=1e-145,
Organism=Caenorhabditis elegans, GI193204778, Length=182, Percent_Identity=31.3186813186813, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71997299, Length=166, Percent_Identity=32.5301204819277, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71997289, Length=166, Percent_Identity=32.5301204819277, Blast_Score=74, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6323581, Length=287, Percent_Identity=29.9651567944251, Blast_Score=99, Evalue=9e-22,
Organism=Drosophila melanogaster, GI28571388, Length=190, Percent_Identity=32.1052631578947, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI281376913, Length=190, Percent_Identity=32.1052631578947, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33229; Mature: 33229

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALES
CCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCHHHH
WVCSFSNWDVLKLMDLSWRRGGLLLGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGR
HHHCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
ELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDL
EEEEECCCEEEEEEECCCCCCCCCHHHCCCEEEECCCEECCCCHHHHHHCCCCEEEEEEC
QHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQV
CHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALES
CCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCHHHH
WVCSFSNWDVLKLMDLSWRRGGLLLGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGR
HHHCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
ELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDL
EEEEECCCEEEEEEECCCCCCCCCHHHCCCEEEECCCEECCCCHHHHHHCCCCEEEEEEC
QHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQV
CHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]