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The map label for this gene is ydhO [H]

Identifier: 238895036

GI number: 238895036

Start: 2920173

End: 2921045

Strand: Direct

Name: ydhO [H]

Synonym: KP1_3066

Alternate gene names: 238895036

Gene position: 2920173-2921045 (Clockwise)

Preceding gene: 238895034

Following gene: 238895038

Centisome position: 55.64

GC content: 57.27

Gene sequence:

>873_bases
GTGGCGCGGCTAAACAAAATCGCGATATCGCTCTGTGCATTACTGTTCACGTCTATCTCATTCACGCCACTGGCTCAGGC
ATCAGGGCATACGCACGCCTCCGCTTCGCCAAAAGCGTTGCCCGCGAAAAGTGGCTCAGAGCGCAAGAAAAAAGCAACCA
GTCAAAAAACTAAAACCACCGCTAAAACCACCAGTAAAAAGTCCTCGCGCACCCGGCTCCCTACCCGCACTACCGCAGCA
AGCCAAACCGCACTTCATCGTCAGGCCGCCGGCGCGACGAAAAAATGCGTGCTGCGTAAAGGTTATAAAAAGCAGTGCGC
GAAAACGGTCGCCGCCAGCGCCGAGCCGACCCTGGCGCTAAACAGCGTCAAAAGCAAATGCGTGGTGCGCAAGGGCTATA
AAAAACGCTGTAAGCCCGAGGCCAGCGAAGCGAATTTAACGATCGCCGACGCCCACAAGGTCCGGGTGCAAAAAGCGCAA
AGTACCGCGATGAACAAACTGATGGGCCAGTTGGGTAAACCCTATCGCTGGGGCGGCACCTCGCCGCGCACCGGGTTTGA
CTGCAGCGGGCTGGTCTATTACGCCTATAAGGACCTGGTCAAGATCCACATCCCGCGTACGGCCAACGAAATGTACCACC
TGCGCGATGCGCGTCCGGTGGATCGTGATGAACTGCAGAGCGGCGATTTAGTCTTCTTCCGCACCCGCGGACGGGGCGCT
GCCGACCATGTCGGCGTCTACGTCGGCAACGGAAAATTCATTCAGTCGCCGCGCACAGGTCGTGATATTCAAATCACCTC
CCTGAGCGAGGATTACTGGGTTCGCCATTATGTCGGCGCTCGTCGCGTCATGACGCCGAAAACCATTCGCTGA

Upstream 100 bases:

>100_bases
GAATATTAACTTTCCGGCTTTTTATGCTTTAGAATCATTCCGGTTTGTCATTCATCGTCAGGCATTTGTACATGTCTGTA
ATTAATCAGGGGATTGCTCA

Downstream 100 bases:

>100_bases
TCCCGGTCTGCCGCTGCGGCGGCAGACCGCCTCTCCTGCTCGATCTCCATCCCCACCCGCAAGGGATATTGCAGATTGCT
CTCTTTGCCCGGCGTATCAC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MARLNKIAISLCALLFTSISFTPLAQASGHTHASASPKALPAKSGSERKKKATSQKTKTTAKTTSKKSSRTRLPTRTTAA
SQTALHRQAAGATKKCVLRKGYKKQCAKTVAASAEPTLALNSVKSKCVVRKGYKKRCKPEASEANLTIADAHKVRVQKAQ
STAMNKLMGQLGKPYRWGGTSPRTGFDCSGLVYYAYKDLVKIHIPRTANEMYHLRDARPVDRDELQSGDLVFFRTRGRGA
ADHVGVYVGNGKFIQSPRTGRDIQITSLSEDYWVRHYVGARRVMTPKTIR

Sequences:

>Translated_290_residues
MARLNKIAISLCALLFTSISFTPLAQASGHTHASASPKALPAKSGSERKKKATSQKTKTTAKTTSKKSSRTRLPTRTTAA
SQTALHRQAAGATKKCVLRKGYKKQCAKTVAASAEPTLALNSVKSKCVVRKGYKKRCKPEASEANLTIADAHKVRVQKAQ
STAMNKLMGQLGKPYRWGGTSPRTGFDCSGLVYYAYKDLVKIHIPRTANEMYHLRDARPVDRDELQSGDLVFFRTRGRGA
ADHVGVYVGNGKFIQSPRTGRDIQITSLSEDYWVRHYVGARRVMTPKTIR
>Mature_289_residues
ARLNKIAISLCALLFTSISFTPLAQASGHTHASASPKALPAKSGSERKKKATSQKTKTTAKTTSKKSSRTRLPTRTTAAS
QTALHRQAAGATKKCVLRKGYKKQCAKTVAASAEPTLALNSVKSKCVVRKGYKKRCKPEASEANLTIADAHKVRVQKAQS
TAMNKLMGQLGKPYRWGGTSPRTGFDCSGLVYYAYKDLVKIHIPRTANEMYHLRDARPVDRDELQSGDLVFFRTRGRGAA
DHVGVYVGNGKFIQSPRTGRDIQITSLSEDYWVRHYVGARRVMTPKTIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=290, Percent_Identity=57.2413793103448, Blast_Score=326, Evalue=1e-90,
Organism=Escherichia coli, GI1786421, Length=246, Percent_Identity=36.9918699186992, Blast_Score=170, Evalue=9e-44,
Organism=Escherichia coli, GI1788501, Length=132, Percent_Identity=35.6060606060606, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788001, Length=119, Percent_Identity=36.1344537815126, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 31870; Mature: 31739

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLNKIAISLCALLFTSISFTPLAQASGHTHASASPKALPAKSGSERKKKATSQKTKTT
CCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AKTTSKKSSRTRLPTRTTAASQTALHRQAAGATKKCVLRKGYKKQCAKTVAASAEPTLAL
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEH
NSVKSKCVVRKGYKKRCKPEASEANLTIADAHKVRVQKAQSTAMNKLMGQLGKPYRWGGT
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
SPRTGFDCSGLVYYAYKDLVKIHIPRTANEMYHLRDARPVDRDELQSGDLVFFRTRGRGA
CCCCCCCCCCCHHHEECCEEEEECCCCCCHHHHHCCCCCCCHHHCCCCCEEEEEECCCCC
ADHVGVYVGNGKFIQSPRTGRDIQITSLSEDYWVRHYVGARRVMTPKTIR
CCCEEEEECCCEEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ARLNKIAISLCALLFTSISFTPLAQASGHTHASASPKALPAKSGSERKKKATSQKTKTT
CHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AKTTSKKSSRTRLPTRTTAASQTALHRQAAGATKKCVLRKGYKKQCAKTVAASAEPTLAL
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEH
NSVKSKCVVRKGYKKRCKPEASEANLTIADAHKVRVQKAQSTAMNKLMGQLGKPYRWGGT
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
SPRTGFDCSGLVYYAYKDLVKIHIPRTANEMYHLRDARPVDRDELQSGDLVFFRTRGRGA
CCCCCCCCCCCHHHEECCEEEEECCCCCCHHHHHCCCCCCCHHHCCCCCEEEEEECCCCC
ADHVGVYVGNGKFIQSPRTGRDIQITSLSEDYWVRHYVGARRVMTPKTIR
CCCEEEEECCCEEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]