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The map label for this gene is yecS [H]

Identifier: 238894936

GI number: 238894936

Start: 2824814

End: 2825740

Strand: Reverse

Name: yecS [H]

Synonym: KP1_2960

Alternate gene names: 238894936

Gene position: 2825740-2824814 (Counterclockwise)

Preceding gene: 238894937

Following gene: 238894935

Centisome position: 53.84

GC content: 63.32

Gene sequence:

>927_bases
ATGCATTCATCTGAAACGATCAAAGTGGTGCCGGCGCGCTATCCGCTGCGGGTGGTCGGGGCTCTGGTCGCCCTGCTGGT
GCTGGCGGTGGTGATCCAGTCGGTGGCCTTTCACCCGCGCTGGGAGTGGGGCGTCTTCGCCCGCTGGTTCTTCGACCCGG
TGATCCTCGAGGGGCTGGGGCAAACCCTGCTCCTGACCCTGCTCGGCACGGTGCTAAGCGTGATCTTCGGCGGCCTGCTG
GCGCTGGCCCGTTTGTCCTCATCGTGGCTGCTCAGCAGTCTCGCCTGGGGCTATATCTGGCTGTTTCGCTCGCTGCCGCT
GATTGTGGTGCTGATCATTCTCTATAACTTTTCCTATCTCTACGACACCCTGTCGCTGGGGATCCCGTTTACCGGCGTGA
CCTGGGCCAGCTATCAGACCATTAACGTGCTGGGGCAATTCTCCACGGCGGTGGTGGGCCTGACCCTGGTGCAGAGCGCC
TATACCGCGGAGATTATTCGCGGCGGCTTTCTCGGCGTTGACCACGGGCAGTATGAAGCCGCCGCCGCGCTGGGGCTACC
CGCCTGGCGGCGCACGCTGCGCATTATTCTGCCGCAGGCGCTGCGCACCATCCTGCCCTCCGGCTTCAACGAGATCATCA
GTCTGGCCAAGGGAACGGCGATGGTGTACGTCCTGGCGATGCCGGAACTGTTCTACACCATCCAGATGATCTACAACCGT
ACCCAGGAGGTGATCCCGCTGTTGATGGTCGGCGCCGCCTGGTATCTGGCGATCACCAGCGTCCTCTCCGCCATTCAGTA
TCTGGTGGAACGGGGCCTGGCGCGCAGCGAGCGCCGCTCGGCGGTAAACAGCGCCCGCAGCAGCCGTCTGAATCAACCCG
CACGTCAACCACAGCCGCAGGAGGCCGTTCATGCCCAGCTCTCATAA

Upstream 100 bases:

>100_bases
AGACCCGGAAGAGTACAGTCAGCCGCCGTACGATGGCCGGCTGCGGTTCACTAAAGCGCTGGCGGTGAGCGCCTACAGCC
ACAGCGCCTGAGGAGGCATT

Downstream 100 bases:

>100_bases
TGGCCATATCTCTATCACCGGGGTCAGCAAATACTATGGCCGCCACAAGGCGCTGGACGATGTGTCGCTGGAGATCCCCC
CGGGCACGGTGACGGTGATC

Product: amino acid ABC transport system permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MHSSETIKVVPARYPLRVVGALVALLVLAVVIQSVAFHPRWEWGVFARWFFDPVILEGLGQTLLLTLLGTVLSVIFGGLL
ALARLSSSWLLSSLAWGYIWLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQFSTAVVGLTLVQSA
YTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILPSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNR
TQEVIPLLMVGAAWYLAITSVLSAIQYLVERGLARSERRSAVNSARSSRLNQPARQPQPQEAVHAQLS

Sequences:

>Translated_308_residues
MHSSETIKVVPARYPLRVVGALVALLVLAVVIQSVAFHPRWEWGVFARWFFDPVILEGLGQTLLLTLLGTVLSVIFGGLL
ALARLSSSWLLSSLAWGYIWLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQFSTAVVGLTLVQSA
YTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILPSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNR
TQEVIPLLMVGAAWYLAITSVLSAIQYLVERGLARSERRSAVNSARSSRLNQPARQPQPQEAVHAQLS
>Mature_308_residues
MHSSETIKVVPARYPLRVVGALVALLVLAVVIQSVAFHPRWEWGVFARWFFDPVILEGLGQTLLLTLLGTVLSVIFGGLL
ALARLSSSWLLSSLAWGYIWLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQFSTAVVGLTLVQSA
YTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILPSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNR
TQEVIPLLMVGAAWYLAITSVLSAIQYLVERGLARSERRSAVNSARSSRLNQPARQPQPQEAVHAQLS

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=227, Percent_Identity=37.0044052863436, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1786873, Length=224, Percent_Identity=32.5892857142857, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=31.9634703196347, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI87082239, Length=178, Percent_Identity=34.8314606741573, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787030, Length=233, Percent_Identity=31.3304721030043, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787086, Length=236, Percent_Identity=29.2372881355932, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787087, Length=185, Percent_Identity=30.8108108108108, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788646, Length=231, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI48994930, Length=134, Percent_Identity=29.8507462686567, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34020; Mature: 34020

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCC
>Mature Secondary Structure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HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]