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The map label for this gene is araJ [H]

Identifier: 238894902

GI number: 238894902

Start: 2789323

End: 2790477

Strand: Reverse

Name: araJ [H]

Synonym: KP1_2924

Alternate gene names: 238894902

Gene position: 2790477-2789323 (Counterclockwise)

Preceding gene: 238894907

Following gene: 238894894

Centisome position: 53.17

GC content: 60.52

Gene sequence:

>1155_bases
ATGAAAAAAACGATTTTTTCACTGGCGCTGGGCACCTTTGGACTTGGCATGGCGGAGTTTGGCATTATGGGCGTGCTGCC
GGATATGGCGCACGATGTCGGAATATCCATTCCCGCCGCCGGCAATATGATTGCCTGGTATGCCTTCGGCGTGGTGATCG
GCGCGCCGATCATGGCGCTGCTCTCCAGCCGGTTTTCCCTGAAATCGGTGATGCTGTTCCTGGCTGGCCTGTGTATTCTC
GGCAATACCCTGTTTACCTTCTCCAGTAGCTACGCCATGCTGGCGCTTGGCCGGCTGGTTTCCGGGTTTCCCCACGGGGC
GTTCTTTGGCGTCGGCGCGATTATCCTGTCGAAAATCGCGCCCCCGGGGAAGGTGACCGCCGCGGTGGCGGGGATGATTG
GCGGCATGACGATCGCTAACCTGGTGGGCGTCCCGGGCGGCACCTGGCTTGGGCATCACTTCAGCTGGCGCTATACCTTT
GCGCTTATCGCGGTATTTAACGTGGCGGTATTTCTGGCGATCTTCTGCTGGGTGCCCACGCTTTATGACCGGGCCAGCAC
GCGGCTGCGCGAGCAGTTCCGTTTTCTTGCCTCCCCGGCGCCGTGGCTGATTTTCGCCGCCACCATGTTCGGTAACGCCG
GCGTGTTTGCCTGGTTCAGCTATATCAAGCCCTTTATGCTCAATGTATCCGGCTTTGCTGAAAGCAAGATGATGCTGATT
ATGATGCTGGCGGGGCTGGGAATGGTGGTCGGCAATCTGTTCAGCGGCAAAATTTCCGGGCGCTACAGCCCGCTGCGCAT
TGCGGCCATGACCGACGGGGTCATTGCCGTGACGCTGCTGCTGATCTTTGCCTTCGGTGAACAGAAAGTCGCTTCGCTGG
CGCTGGCGTTTCTCTGCTGCGCGGGACTATTCGCCCTGTCAGCGCCGCTGCAGATCCTGCTGCTGCAGAACGCCAAAGGC
GGCGAGATGCTGGGGGCGGCCGGGGGACAGATCGCCTTTAACCTCGGCAGCGCCATCGGCGCCTTCTGCGGCGGAATGAT
GATCGCCCAGGGCTTTGGCTGGAACAGCGTGGCGCTCCCCGCCGCCGCGCTGTCGTTTCTGGCGATGAGCGCCTTGCTCA
TCTATGGCTGTCATCAGCGGCGACAAGCTTACTAA

Upstream 100 bases:

>100_bases
GCTGTTGTATGGAGGAAACTGCCGTCGGGCGTTTTTAGCTGGTGTGTCGGGGCGGGATGGTAAATAATGCCGGCCGGCTC
TCAATACCCCTATAAGATGT

Downstream 100 bases:

>100_bases
CGACGCCTACTCACGCCAGGGTTCGCCCAGGGTCAGCATCAGGCGGTTGGCCCAGGCGAAAAAGGCCGCGGACTGCAGCA
GATCCAGCTGGGCCAGAGTA

Product: MFS transport protein AraJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKKTIFSLALGTFGLGMAEFGIMGVLPDMAHDVGISIPAAGNMIAWYAFGVVIGAPIMALLSSRFSLKSVMLFLAGLCIL
GNTLFTFSSSYAMLALGRLVSGFPHGAFFGVGAIILSKIAPPGKVTAAVAGMIGGMTIANLVGVPGGTWLGHHFSWRYTF
ALIAVFNVAVFLAIFCWVPTLYDRASTRLREQFRFLASPAPWLIFAATMFGNAGVFAWFSYIKPFMLNVSGFAESKMMLI
MMLAGLGMVVGNLFSGKISGRYSPLRIAAMTDGVIAVTLLLIFAFGEQKVASLALAFLCCAGLFALSAPLQILLLQNAKG
GEMLGAAGGQIAFNLGSAIGAFCGGMMIAQGFGWNSVALPAAALSFLAMSALLIYGCHQRRQAY

Sequences:

>Translated_384_residues
MKKTIFSLALGTFGLGMAEFGIMGVLPDMAHDVGISIPAAGNMIAWYAFGVVIGAPIMALLSSRFSLKSVMLFLAGLCIL
GNTLFTFSSSYAMLALGRLVSGFPHGAFFGVGAIILSKIAPPGKVTAAVAGMIGGMTIANLVGVPGGTWLGHHFSWRYTF
ALIAVFNVAVFLAIFCWVPTLYDRASTRLREQFRFLASPAPWLIFAATMFGNAGVFAWFSYIKPFMLNVSGFAESKMMLI
MMLAGLGMVVGNLFSGKISGRYSPLRIAAMTDGVIAVTLLLIFAFGEQKVASLALAFLCCAGLFALSAPLQILLLQNAKG
GEMLGAAGGQIAFNLGSAIGAFCGGMMIAQGFGWNSVALPAAALSFLAMSALLIYGCHQRRQAY
>Mature_384_residues
MKKTIFSLALGTFGLGMAEFGIMGVLPDMAHDVGISIPAAGNMIAWYAFGVVIGAPIMALLSSRFSLKSVMLFLAGLCIL
GNTLFTFSSSYAMLALGRLVSGFPHGAFFGVGAIILSKIAPPGKVTAAVAGMIGGMTIANLVGVPGGTWLGHHFSWRYTF
ALIAVFNVAVFLAIFCWVPTLYDRASTRLREQFRFLASPAPWLIFAATMFGNAGVFAWFSYIKPFMLNVSGFAESKMMLI
MMLAGLGMVVGNLFSGKISGRYSPLRIAAMTDGVIAVTLLLIFAFGEQKVASLALAFLCCAGLFALSAPLQILLLQNAKG
GEMLGAAGGQIAFNLGSAIGAFCGGMMIAQGFGWNSVALPAAALSFLAMSALLIYGCHQRRQAY

Specific function: May be involved in either the transport or processing of arabinose polymers [H]

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786595, Length=383, Percent_Identity=72.3237597911227, Blast_Score=543, Evalue=1e-156,
Organism=Escherichia coli, GI1787947, Length=391, Percent_Identity=32.9923273657289, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI145693198, Length=344, Percent_Identity=28.1976744186047, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787808, Length=234, Percent_Identity=26.0683760683761, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40427; Mature: 40427

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744033; 9278503 [H]