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The map label for this gene is ydiF [H]

Identifier: 238894892

GI number: 238894892

Start: 2777260

End: 2778990

Strand: Direct

Name: ydiF [H]

Synonym: KP1_2912

Alternate gene names: 238894892

Gene position: 2777260-2778990 (Clockwise)

Preceding gene: 238894891

Following gene: 238894895

Centisome position: 52.92

GC content: 64.41

Gene sequence:

>1731_bases
TTGAGTAAGTTGACTATGAGTACATTACTAACTGCCCATGCGCTCCACGTGGAGACGGCTTTTGGGCCGCTGTTTAACTC
CCTCTCCTTCACCCTGAAGAAAGGTGACCGGATCGGTCTCATCGGCCATAACGGTTGCGGCAAAAGCACCCTGCTGCAGG
TGCTGGACGGCACCCTCGCGCCCACCTCGGGCAGCGTCTCGCTCGCCGGTCAGTGTCTGATGGCCCGCGTTGAACAGCAT
CTGCCGGAGGCGCTGCATACGCAGTCGCTGCTGCAGGCGGTGCTGGCCCCATTACCCGCCGACGCGCGGGAAGCACAGCG
CTGGCTGGCCGAGCGCCTGCTGGCGCAGATGGGCTTTACCCCGGCGGTGATGGAGCAGCAGACCGCCACCCTGAGCGGCG
GCCAGCACACGCGTCTGCTGCTGGCCCGGGCGCTGATCCGCCAGCCTGATCTGCTCTTGTTGGATGAGCCGGGCAACCAT
CTCGATCTGCCCACCCTGCTGTGGCTGGAAAGCTTCCTGCAAACCTGGCAGGGGAGTTTCGTACTGGTGTCACACGACAA
CACCTTACTGGATGCTGTAACTAATGCGAGTTGGATCCTCCGTGACCAGACGCTACATTGCTTCGCCTTACCCTGCAGCG
CTGCCCGTCAGGCACTGCAGGAGCAGGATGAAAGCGCCGCGTTACGTCATAAGGCGGAGCAAAAAGAGATCGACCGGGTC
AGCGCCAGCGCCCGGCGGCTGGCCACCTGGGGTCGGGTCTATGACAATGAAGATCTCGCCCGCAAAGCCAAACAGATGGA
GAAGCAGGTCGCCCGCCTGAAAGACGAGCAGACCGAGCTCAGCGTCGGCCCGCCGTGGCGCCTGGTGTTACAGGGGGACG
CCCTGCCGGCCGACCGCCTTTTGGAGATGGACACCCTTCCCGTCTCGCCCGCGCCGGGTCAGCCATCCCTCTTCACCACC
GGCGTGGCGCGCCTGCGCAGCGGCGATCGCGTGGCCATCATGGGACGTAATGGCGGCGGCAAATCGTCCCTGCTGCGCCT
GCTGTGGCAGCAGATGAACAACGCATCGCCTCTCCCGGGGCTGCGCCTGCATCCCCGGTTGCACCCCGGCTACTATGACC
AGACGCTGGCGCAGTTGCCGGACGAGGCCAGCCTGCTCGAGGCCCTGACGCCGTTTGCCCCGTCGGCGGACACCCGTAAA
CGGGCGCTGATCGCCGCCGGGTTTGGCTGGGCGAGACATAGCCAGAAGGTCAGCACCCTCAGCGGCGGCGAGCGATCGCG
GCTGCTGTTCGTTGGCCTGTCGCTGGCGCGCTACAGTCTGCTGCTGCTGGATGAACCCACCAACCATCTTGATATGGAGG
GTAAAGCGGCGCTGGCGCAGACGCTGCGCGATTACCCCGGCGGCGTGCTGCTGGTCAGTCATGACCGCCAGCTGATTAGC
GAAAGCTGTAACCGCTTCTGGCTGATTGACAGCGCCGGGCTAACGGAGTGGCACAGCCTGGAGGAGGTCTATGCCCGTCT
GCAGGCCGTGGCGCCCGCCCCGGACAGTCGGCTCGCTTTGCAGAGTACACCCGCCGGGGCTGACGATGATGAGGAGGCGC
TGCTGGCGCGGCTGATTGACCTGGAGCAGTGGCTGGCTGACGACATGGCCCGCAAGCCAAAACATCAAAAGCCGTCACTG
CAGGCACAGTGGCAAGAGGAGATTGCCCGCCTGCTTAACCAACTGACGTAA

Upstream 100 bases:

>100_bases
AACTATGGCTTGAGCGAAGACTCTTCACGCAATCCCTTCTCTCCGGCTTACCGGGTTATCGTCAGCGAGTTTTGACGAGG
CATTTGCATGCCTGTAACTC

Downstream 100 bases:

>100_bases
TCTCCATGTCCCCCCACCGGCTAAGGCGCCACGCCCTTAGCCGGTGTTTCCGGACCGGGTAAACTGCTGCTCGGTCATTA
CCTTTCCCCACTGCTCCCCC

Product: putative transporter ATP-binding component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MSKLTMSTLLTAHALHVETAFGPLFNSLSFTLKKGDRIGLIGHNGCGKSTLLQVLDGTLAPTSGSVSLAGQCLMARVEQH
LPEALHTQSLLQAVLAPLPADAREAQRWLAERLLAQMGFTPAVMEQQTATLSGGQHTRLLLARALIRQPDLLLLDEPGNH
LDLPTLLWLESFLQTWQGSFVLVSHDNTLLDAVTNASWILRDQTLHCFALPCSAARQALQEQDESAALRHKAEQKEIDRV
SASARRLATWGRVYDNEDLARKAKQMEKQVARLKDEQTELSVGPPWRLVLQGDALPADRLLEMDTLPVSPAPGQPSLFTT
GVARLRSGDRVAIMGRNGGGKSSLLRLLWQQMNNASPLPGLRLHPRLHPGYYDQTLAQLPDEASLLEALTPFAPSADTRK
RALIAAGFGWARHSQKVSTLSGGERSRLLFVGLSLARYSLLLLDEPTNHLDMEGKAALAQTLRDYPGGVLLVSHDRQLIS
ESCNRFWLIDSAGLTEWHSLEEVYARLQAVAPAPDSRLALQSTPAGADDDEEALLARLIDLEQWLADDMARKPKHQKPSL
QAQWQEEIARLLNQLT

Sequences:

>Translated_576_residues
MSKLTMSTLLTAHALHVETAFGPLFNSLSFTLKKGDRIGLIGHNGCGKSTLLQVLDGTLAPTSGSVSLAGQCLMARVEQH
LPEALHTQSLLQAVLAPLPADAREAQRWLAERLLAQMGFTPAVMEQQTATLSGGQHTRLLLARALIRQPDLLLLDEPGNH
LDLPTLLWLESFLQTWQGSFVLVSHDNTLLDAVTNASWILRDQTLHCFALPCSAARQALQEQDESAALRHKAEQKEIDRV
SASARRLATWGRVYDNEDLARKAKQMEKQVARLKDEQTELSVGPPWRLVLQGDALPADRLLEMDTLPVSPAPGQPSLFTT
GVARLRSGDRVAIMGRNGGGKSSLLRLLWQQMNNASPLPGLRLHPRLHPGYYDQTLAQLPDEASLLEALTPFAPSADTRK
RALIAAGFGWARHSQKVSTLSGGERSRLLFVGLSLARYSLLLLDEPTNHLDMEGKAALAQTLRDYPGGVLLVSHDRQLIS
ESCNRFWLIDSAGLTEWHSLEEVYARLQAVAPAPDSRLALQSTPAGADDDEEALLARLIDLEQWLADDMARKPKHQKPSL
QAQWQEEIARLLNQLT
>Mature_575_residues
SKLTMSTLLTAHALHVETAFGPLFNSLSFTLKKGDRIGLIGHNGCGKSTLLQVLDGTLAPTSGSVSLAGQCLMARVEQHL
PEALHTQSLLQAVLAPLPADAREAQRWLAERLLAQMGFTPAVMEQQTATLSGGQHTRLLLARALIRQPDLLLLDEPGNHL
DLPTLLWLESFLQTWQGSFVLVSHDNTLLDAVTNASWILRDQTLHCFALPCSAARQALQEQDESAALRHKAEQKEIDRVS
ASARRLATWGRVYDNEDLARKAKQMEKQVARLKDEQTELSVGPPWRLVLQGDALPADRLLEMDTLPVSPAPGQPSLFTTG
VARLRSGDRVAIMGRNGGGKSSLLRLLWQQMNNASPLPGLRLHPRLHPGYYDQTLAQLPDEASLLEALTPFAPSADTRKR
ALIAAGFGWARHSQKVSTLSGGERSRLLFVGLSLARYSLLLLDEPTNHLDMEGKAALAQTLRDYPGGVLLVSHDRQLISE
SCNRFWLIDSAGLTEWHSLEEVYARLQAVAPAPDSRLALQSTPAGADDDEEALLARLIDLEQWLADDMARKPKHQKPSLQ
AQWQEEIARLLNQLT

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=532, Percent_Identity=31.203007518797, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI10947137, Length=520, Percent_Identity=29.0384615384615, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI27881506, Length=520, Percent_Identity=29.0384615384615, Blast_Score=174, Evalue=3e-43,
Organism=Homo sapiens, GI10947135, Length=522, Percent_Identity=29.6934865900383, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI69354671, Length=522, Percent_Identity=29.6934865900383, Blast_Score=168, Evalue=1e-41,
Organism=Escherichia coli, GI1789751, Length=524, Percent_Identity=31.6793893129771, Blast_Score=209, Evalue=5e-55,
Organism=Escherichia coli, GI1787182, Length=538, Percent_Identity=27.3234200743494, Blast_Score=176, Evalue=4e-45,
Organism=Escherichia coli, GI1787041, Length=536, Percent_Identity=27.0522388059701, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI2367384, Length=501, Percent_Identity=27.9441117764471, Blast_Score=151, Evalue=1e-37,
Organism=Escherichia coli, GI1787758, Length=180, Percent_Identity=32.7777777777778, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788506, Length=207, Percent_Identity=30.4347826086957, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1789962, Length=202, Percent_Identity=28.2178217821782, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1789891, Length=200, Percent_Identity=30, Blast_Score=76, Evalue=8e-15,
Organism=Escherichia coli, GI1787500, Length=198, Percent_Identity=24.7474747474747, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1786703, Length=185, Percent_Identity=32.4324324324324, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787164, Length=205, Percent_Identity=34.6341463414634, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788053, Length=179, Percent_Identity=35.7541899441341, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081834, Length=184, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI87081791, Length=192, Percent_Identity=31.7708333333333, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1786563, Length=193, Percent_Identity=30.5699481865285, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788165, Length=202, Percent_Identity=30.1980198019802, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI48994997, Length=206, Percent_Identity=29.126213592233, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788761, Length=191, Percent_Identity=30.3664921465969, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786398, Length=214, Percent_Identity=28.5046728971963, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786253, Length=175, Percent_Identity=31.4285714285714, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1790739, Length=205, Percent_Identity=32.1951219512195, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=537, Percent_Identity=29.4227188081937, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17555318, Length=501, Percent_Identity=30.5389221556886, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17553372, Length=546, Percent_Identity=29.6703296703297, Blast_Score=184, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6321121, Length=536, Percent_Identity=28.9179104477612, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6320874, Length=512, Percent_Identity=27.1484375, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6324314, Length=179, Percent_Identity=35.7541899441341, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6323278, Length=211, Percent_Identity=31.7535545023697, Blast_Score=97, Evalue=9e-21,
Organism=Saccharomyces cerevisiae, GI6325030, Length=371, Percent_Identity=29.1105121293801, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24642252, Length=530, Percent_Identity=31.5094339622642, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI18859989, Length=530, Percent_Identity=31.5094339622642, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24641342, Length=508, Percent_Identity=30.7086614173228, Blast_Score=195, Evalue=6e-50,
Organism=Drosophila melanogaster, GI24666836, Length=549, Percent_Identity=30.2367941712204, Blast_Score=191, Evalue=2e-48,
Organism=Drosophila melanogaster, GI28574259, Length=143, Percent_Identity=34.965034965035, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24648279, Length=143, Percent_Identity=33.5664335664336, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI161078426, Length=143, Percent_Identity=33.5664335664336, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 63382; Mature: 63251

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTMSTLLTAHALHVETAFGPLFNSLSFTLKKGDRIGLIGHNGCGKSTLLQVLDGTLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHCCCCC
PTSGSVSLAGQCLMARVEQHLPEALHTQSLLQAVLAPLPADAREAQRWLAERLLAQMGFT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PAVMEQQTATLSGGQHTRLLLARALIRQPDLLLLDEPGNHLDLPTLLWLESFLQTWQGSF
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCE
VLVSHDNTLLDAVTNASWILRDQTLHCFALPCSAARQALQEQDESAALRHKAEQKEIDRV
EEEECCCHHHHHHCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SASARRLATWGRVYDNEDLARKAKQMEKQVARLKDEQTELSVGPPWRLVLQGDALPADRL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEECCCCCHHHH
LEMDTLPVSPAPGQPSLFTTGVARLRSGDRVAIMGRNGGGKSSLLRLLWQQMNNASPLPG
HCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC
LRLHPRLHPGYYDQTLAQLPDEASLLEALTPFAPSADTRKRALIAAGFGWARHSQKVSTL
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHEEEEECCCHHHHCCHHHHC
SGGERSRLLFVGLSLARYSLLLLDEPTNHLDMEGKAALAQTLRDYPGGVLLVSHDRQLIS
CCCCCCEEEEEEHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHH
ESCNRFWLIDSAGLTEWHSLEEVYARLQAVAPAPDSRLALQSTPAGADDDEEALLARLID
HCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHH
LEQWLADDMARKPKHQKPSLQAQWQEEIARLLNQLT
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKLTMSTLLTAHALHVETAFGPLFNSLSFTLKKGDRIGLIGHNGCGKSTLLQVLDGTLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHCCCCC
PTSGSVSLAGQCLMARVEQHLPEALHTQSLLQAVLAPLPADAREAQRWLAERLLAQMGFT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PAVMEQQTATLSGGQHTRLLLARALIRQPDLLLLDEPGNHLDLPTLLWLESFLQTWQGSF
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCE
VLVSHDNTLLDAVTNASWILRDQTLHCFALPCSAARQALQEQDESAALRHKAEQKEIDRV
EEEECCCHHHHHHCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SASARRLATWGRVYDNEDLARKAKQMEKQVARLKDEQTELSVGPPWRLVLQGDALPADRL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEECCCCCHHHH
LEMDTLPVSPAPGQPSLFTTGVARLRSGDRVAIMGRNGGGKSSLLRLLWQQMNNASPLPG
HCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC
LRLHPRLHPGYYDQTLAQLPDEASLLEALTPFAPSADTRKRALIAAGFGWARHSQKVSTL
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHEEEEECCCHHHHCCHHHHC
SGGERSRLLFVGLSLARYSLLLLDEPTNHLDMEGKAALAQTLRDYPGGVLLVSHDRQLIS
CCCCCCEEEEEEHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHH
ESCNRFWLIDSAGLTEWHSLEEVYARLQAVAPAPDSRLALQSTPAGADDDEEALLARLID
HCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHH
LEQWLADDMARKPKHQKPSLQAQWQEEIARLLNQLT
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]