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The map label for this gene is ydfM [H]

Identifier: 238894871

GI number: 238894871

Start: 2760359

End: 2761285

Strand: Reverse

Name: ydfM [H]

Synonym: KP1_2888

Alternate gene names: 238894871

Gene position: 2761285-2760359 (Counterclockwise)

Preceding gene: 238894873

Following gene: 238894870

Centisome position: 52.61

GC content: 59.55

Gene sequence:

>927_bases
ATAATGACACAACATAATTTTGAAAATGATAATAAATATCATGAGCGTTCGGTGCAGGCGCGAAAGAGTACCCTTGTTAG
CGTGGTGGTTAATATTTTCCTTTCTGCCTTACAGGTAGTCGTGGGAATATTTTCCGGCTCTCAGGGATTAATTGCCGACG
GAATGCACTCTTTTTCCGATCTGGTCGCCGATGGCGTGGTATTGATGGCGAATAAAAAGAGCCGTCGACCGTCTGACCAC
GATCACCACTATGGCCACTGGCGCTATGAGAACGGCGCCTCCCTAATCATCGGCGCGATGCTGCTGCTCGTCGGGGGTGG
CATGCTATGGTCCGCGGCGGGCCATCTCGCGCAACCGCAAACTATTCCGCCGGTGCACAGCGCGGCGCTGTGGATGGCGC
TGGTGGCGCTGGCCGTCAAGGAGGGGCTGTTTCGCTATATGCTGGCGGCCGCCAGGCGGCTGAATTCGTCGCTGCTTATC
GCCAATGCCTGGCATGCCCGCTCTGACGCCGCATCCTCCCTGGTGGTGGCCCTGGGGATTATCGGTAATCTGGCCGGGTT
CGCCTGGTTCGACCCGCTCGCCGCGCTGGCGGTGGGGCTGCTGATTGCGCGCATGGGCTATCGTTTCGCCGTCAGCGCGC
TGCATGATTTAATGGACCGTGCGGTTGATGAAGAGATGCAGCAGGCGATCGCCGATACGCTGCGAACCACGCCGGGCGTG
GCGGGCCTCCACGATCTGAAAACCCGTAAGGCGGGGGATCTGGTGCTGGTGGATGTCCATCTCGAGGTGGCTGGCGAGAT
GTCGGTAGCCGAAGGGCATCAGATTGCCCGTCACGCGCGGGAGCGGGTGCTGGCGCAGCATCCGGTGCTTAATGTGATGG
TGCATCTCGATCCCTGCGAAGCGCAGGGGTTGACGAAAGCGGTCTGA

Upstream 100 bases:

>100_bases
GACCGCCGCGATATCGTTAAACGGCAAGGCAATGGCTTTTATATTGTTAAGCATAAACTCAGTTTGTCAGTTTATTCTTC
CCGCTCACAAAGGGAGAGAA

Downstream 100 bases:

>100_bases
TACACCCGGTAGCATAAGCGGAAAAATGAATTGGCTCAGCGGTTATTTTTTCTTCTGAGCCATTATTGCTGGCGCATTGA
TTGCCTGAAATATAAAAAAG

Product: putative cation efflux system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MMTQHNFENDNKYHERSVQARKSTLVSVVVNIFLSALQVVVGIFSGSQGLIADGMHSFSDLVADGVVLMANKKSRRPSDH
DHHYGHWRYENGASLIIGAMLLLVGGGMLWSAAGHLAQPQTIPPVHSAALWMALVALAVKEGLFRYMLAAARRLNSSLLI
ANAWHARSDAASSLVVALGIIGNLAGFAWFDPLAALAVGLLIARMGYRFAVSALHDLMDRAVDEEMQQAIADTLRTTPGV
AGLHDLKTRKAGDLVLVDVHLEVAGEMSVAEGHQIARHARERVLAQHPVLNVMVHLDPCEAQGLTKAV

Sequences:

>Translated_308_residues
MMTQHNFENDNKYHERSVQARKSTLVSVVVNIFLSALQVVVGIFSGSQGLIADGMHSFSDLVADGVVLMANKKSRRPSDH
DHHYGHWRYENGASLIIGAMLLLVGGGMLWSAAGHLAQPQTIPPVHSAALWMALVALAVKEGLFRYMLAAARRLNSSLLI
ANAWHARSDAASSLVVALGIIGNLAGFAWFDPLAALAVGLLIARMGYRFAVSALHDLMDRAVDEEMQQAIADTLRTTPGV
AGLHDLKTRKAGDLVLVDVHLEVAGEMSVAEGHQIARHARERVLAQHPVLNVMVHLDPCEAQGLTKAV
>Mature_308_residues
MMTQHNFENDNKYHERSVQARKSTLVSVVVNIFLSALQVVVGIFSGSQGLIADGMHSFSDLVADGVVLMANKKSRRPSDH
DHHYGHWRYENGASLIIGAMLLLVGGGMLWSAAGHLAQPQTIPPVHSAALWMALVALAVKEGLFRYMLAAARRLNSSLLI
ANAWHARSDAASSLVVALGIIGNLAGFAWFDPLAALAVGLLIARMGYRFAVSALHDLMDRAVDEEMQQAIADTLRTTPGV
AGLHDLKTRKAGDLVLVDVHLEVAGEMSVAEGHQIARHARERVLAQHPVLNVMVHLDPCEAQGLTKAV

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Homo sapiens, GI57164948, Length=266, Percent_Identity=22.9323308270677, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI1790349, Length=266, Percent_Identity=29.3233082706767, Blast_Score=115, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6325032, Length=242, Percent_Identity=28.099173553719, Blast_Score=89, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6323831, Length=250, Percent_Identity=28.4, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 33244; Mature: 33244

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTQHNFENDNKYHERSVQARKSTLVSVVVNIFLSALQVVVGIFSGSQGLIADGMHSFSD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LVADGVVLMANKKSRRPSDHDHHYGHWRYENGASLIIGAMLLLVGGGMLWSAAGHLAQPQ
HHHCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHCCCCCCCC
TIPPVHSAALWMALVALAVKEGLFRYMLAAARRLNSSLLIANAWHARSDAASSLVVALGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH
IGNLAGFAWFDPLAALAVGLLIARMGYRFAVSALHDLMDRAVDEEMQQAIADTLRTTPGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGLHDLKTRKAGDLVLVDVHLEVAGEMSVAEGHQIARHARERVLAQHPVLNVMVHLDPCE
CCHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
AQGLTKAV
CCCCCCCC
>Mature Secondary Structure
MMTQHNFENDNKYHERSVQARKSTLVSVVVNIFLSALQVVVGIFSGSQGLIADGMHSFSD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LVADGVVLMANKKSRRPSDHDHHYGHWRYENGASLIIGAMLLLVGGGMLWSAAGHLAQPQ
HHHCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHCCCCCCCC
TIPPVHSAALWMALVALAVKEGLFRYMLAAARRLNSSLLIANAWHARSDAASSLVVALGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH
IGNLAGFAWFDPLAALAVGLLIARMGYRFAVSALHDLMDRAVDEEMQQAIADTLRTTPGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGLHDLKTRKAGDLVLVDVHLEVAGEMSVAEGHQIARHARERVLAQHPVLNVMVHLDPCE
CCHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
AQGLTKAV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]