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The map label for this gene is rhaR [C]

Identifier: 238894865

GI number: 238894865

Start: 2750256

End: 2751200

Strand: Reverse

Name: rhaR [C]

Synonym: KP1_2882

Alternate gene names: 238894865

Gene position: 2751200-2750256 (Counterclockwise)

Preceding gene: 238894866

Following gene: 238894864

Centisome position: 52.42

GC content: 37.46

Gene sequence:

>945_bases
ATGTTACACCATGATATTCATGAAAAGCTACTGGCTTATACCGATAGAGAACTCGAACTGCTTCGCGCTAACTATCAACT
GTGTCATAAATTCAAAAGCCATATGGAGCGAAGGTTTTTCAAAGACAACTACATTCATATTGAAAAGCAGACCCGATTTA
CTAAAATTCCGTTGCATTCTCATGGCTTTATCGAGCTTATTTATATATATCAGGGTAAAATGCATCAGAAGATTAATGAA
GAAAGTCTCACTTTAGGTAAGGGGGAGATCCTGCTTATCAACCAGTTTGCCAGACACGAAATTGAAGCCGCAGGGCAGAA
TGATATTATCATCAATTTTATTATTAAGACCGAATTTTTCGGTCGACTCATGTCCCTTTTTGACGAAAATAACATCATTT
CCCGTTTTATCCTTTCAGCAATTAATGGCAGAAAAAAACATGGAGAGCATATTCACTTTAAAGTGGGGGAAATCGACGCA
ATTCAAAACATTATGCATGTCATCATTAGCGAGATCTACAGTAATAACCACTTAAAAGAGATACGCGTCAATTTCCTGGT
GGGACTGTTGATGACCGAACTGCTCTCGAATGTGCAAGCCAGCGATTACCATATCAACGGCAGTTACAATGAATCACTTG
CCATGGCCGTGTTGAGATATATTGATACCGATTATAAAACTGCCAGCCTGAAAGAGATCTCCTGTCGTTTAAATCAGCCT
AATTATAAGGTGAGTAAACTGATAAAAGACTTCACTGGTAAGAACTTTAGCGATTTGTTGGTTGAAAAACGCCTGGATGT
GTTGATCCATCTCCTTAAGCATACTAATCACTCTATTATTGATGTTATTAATATGACGGGTTATGAAAACGCCTCGCATT
GTTATAAGGTATTTAAAGAGAAATATAATATGAGTATTAAGGAGTATCGTGATCTGAACTCCTGA

Upstream 100 bases:

>100_bases
TACCTATCATCACTTTTATGACATTACCGATGCAGGTGAGATAAAAGTACTATTGTAATGATAGTGCATACCCAAACGTT
CGCTCCAGTTAGGTACTTTT

Downstream 100 bases:

>100_bases
ATAGTAAATTGGCTCACAGCGTTCATGCTATTGCATGTTTTTGTAATAAGTAAAATCGGCAACAACCGATATATAAAAAG
GCAAGCTGGGTTATAACACG

Product: putative helix-turn-helix AraC-type trancriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; AraC Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator -Type; AraC/XylS Family Transcriptional Regulator; 2-Isopropylmalate Synthase; AraC Family Transcription Regulator; AraC-Type Regulatory Protein; Helix-Turn-Helix AraC-Type Trancriptional Regulator; Melibiose Operon Regulatory Protein; Arac Family Transcriptional Regulator

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLHHDIHEKLLAYTDRELELLRANYQLCHKFKSHMERRFFKDNYIHIEKQTRFTKIPLHSHGFIELIYIYQGKMHQKINE
ESLTLGKGEILLINQFARHEIEAAGQNDIIINFIIKTEFFGRLMSLFDENNIISRFILSAINGRKKHGEHIHFKVGEIDA
IQNIMHVIISEIYSNNHLKEIRVNFLVGLLMTELLSNVQASDYHINGSYNESLAMAVLRYIDTDYKTASLKEISCRLNQP
NYKVSKLIKDFTGKNFSDLLVEKRLDVLIHLLKHTNHSIIDVINMTGYENASHCYKVFKEKYNMSIKEYRDLNS

Sequences:

>Translated_314_residues
MLHHDIHEKLLAYTDRELELLRANYQLCHKFKSHMERRFFKDNYIHIEKQTRFTKIPLHSHGFIELIYIYQGKMHQKINE
ESLTLGKGEILLINQFARHEIEAAGQNDIIINFIIKTEFFGRLMSLFDENNIISRFILSAINGRKKHGEHIHFKVGEIDA
IQNIMHVIISEIYSNNHLKEIRVNFLVGLLMTELLSNVQASDYHINGSYNESLAMAVLRYIDTDYKTASLKEISCRLNQP
NYKVSKLIKDFTGKNFSDLLVEKRLDVLIHLLKHTNHSIIDVINMTGYENASHCYKVFKEKYNMSIKEYRDLNS
>Mature_314_residues
MLHHDIHEKLLAYTDRELELLRANYQLCHKFKSHMERRFFKDNYIHIEKQTRFTKIPLHSHGFIELIYIYQGKMHQKINE
ESLTLGKGEILLINQFARHEIEAAGQNDIIINFIIKTEFFGRLMSLFDENNIISRFILSAINGRKKHGEHIHFKVGEIDA
IQNIMHVIISEIYSNNHLKEIRVNFLVGLLMTELLSNVQASDYHINGSYNESLAMAVLRYIDTDYKTASLKEISCRLNQP
NYKVSKLIKDFTGKNFSDLLVEKRLDVLIHLLKHTNHSIIDVINMTGYENASHCYKVFKEKYNMSIKEYRDLNS

Specific function: Activator Of The L-Rhamnose Operon. Rhar Putatively Autoregulates Its Synthesis. [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36942; Mature: 36942

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHHDIHEKLLAYTDRELELLRANYQLCHKFKSHMERRFFKDNYIHIEKQTRFTKIPLHS
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCC
HGFIELIYIYQGKMHQKINEESLTLGKGEILLINQFARHEIEAAGQNDIIINFIIKTEFF
CCCEEEEEEECCHHHHHCCCCCEEECCCCEEEEEHHHHHHHHCCCCCCEEEEEEEHHHHH
GRLMSLFDENNIISRFILSAINGRKKHGEHIHFKVGEIDAIQNIMHVIISEIYSNNHLKE
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHH
IRVNFLVGLLMTELLSNVQASDYHINGSYNESLAMAVLRYIDTDYKTASLKEISCRLNQP
HHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
NYKVSKLIKDFTGKNFSDLLVEKRLDVLIHLLKHTNHSIIDVINMTGYENASHCYKVFKE
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
KYNMSIKEYRDLNS
HHCCCHHHHCCCCC
>Mature Secondary Structure
MLHHDIHEKLLAYTDRELELLRANYQLCHKFKSHMERRFFKDNYIHIEKQTRFTKIPLHS
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCC
HGFIELIYIYQGKMHQKINEESLTLGKGEILLINQFARHEIEAAGQNDIIINFIIKTEFF
CCCEEEEEEECCHHHHHCCCCCEEECCCCEEEEEHHHHHHHHCCCCCCEEEEEEEHHHHH
GRLMSLFDENNIISRFILSAINGRKKHGEHIHFKVGEIDAIQNIMHVIISEIYSNNHLKE
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHH
IRVNFLVGLLMTELLSNVQASDYHINGSYNESLAMAVLRYIDTDYKTASLKEISCRLNQP
HHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
NYKVSKLIKDFTGKNFSDLLVEKRLDVLIHLLKHTNHSIIDVINMTGYENASHCYKVFKE
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
KYNMSIKEYRDLNS
HHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA