Click here to switch to the map view.

The map label for this gene is 238894832

Identifier: 238894832

GI number: 238894832

Start: 2715322

End: 2716017

Strand: Direct

Name: 238894832

Synonym: KP1_2847

Alternate gene names: NA

Gene position: 2715322-2716017 (Clockwise)

Preceding gene: 238894830

Following gene: 238894833

Centisome position: 51.74

GC content: 62.93

Gene sequence:

>696_bases
GTGATCGTTCCCGCTTTTAGCCAAGGTCTTTACGGCCGTTTACGCCAGCTGGCCGCCGCTGACTGGCAGCGCTATGTGGC
GCATCCTTTCGTCCAGCAACTTGCCGATGGGACGCTGGCGGAAAACGCCTTTCGTCGCTATCTGACCCAGGATTATCTGT
TTCTGATTCACTTTGCCCGCAGCTACGCGCTGCTGGTGAGTAAACTGCGCACGCTGCCGGAGATGCGGGCCGCGGCCGCC
TCGATGAATGCCATCCTCAACGAACTGCCGCTGCACGTCGGCTACTGTGCCCAGTGGGGGATTAGCGAACCGGAGATGGC
CGCCCAACCTGAAGCCCCCGAAACCCTCAACTATACCCGCTATGTGCTGGATATTGGCCACTCGGGTGACGCGCTGGATC
TGCTGGTCGCCCTGATGCCCTGCGTCGCGGGCTACGCCGAAATCGGTCTCGGCCTGCTGCAGCATCCCGCCACCCGACTG
GACGATAACCCCTACGCCTCATGGATCCGCAACTATGGCGATGAAGGCTATCTGCAGGGCGTCAGCGCCGCGCTGGCGCT
GTTGGAAACGGTGTGGCAGCAGCGCGGGAGCGAGGCGCGAATCACTGAGCTGAGCGAGATTTTCACCACCGCCACCCGCC
TTGAGGCGCAGTTCTGGCAGATGGGCCTCAACGCGACGGCGGAGACCCGGGCGTGA

Upstream 100 bases:

>100_bases
ATGCCAGCGAAGGGACGGGTCGGCAATTTTGCCAGCATTACCGCCATTGCCTGTTCACACCCCTGCACGCCCGGATCTCC
CCTGAATAAATGGAGGTCCT

Downstream 100 bases:

>100_bases
CGGCGCCGGGTATCGAGGTCCGAGGCCTGAGCCTGCATTTCGGCGACCGCCGGCTGTTCGACAACCTGTCGTTTACGGTC
CCCGGCGGGCAGTGGGTGTC

Product: putative ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MIVPAFSQGLYGRLRQLAAADWQRYVAHPFVQQLADGTLAENAFRRYLTQDYLFLIHFARSYALLVSKLRTLPEMRAAAA
SMNAILNELPLHVGYCAQWGISEPEMAAQPEAPETLNYTRYVLDIGHSGDALDLLVALMPCVAGYAEIGLGLLQHPATRL
DDNPYASWIRNYGDEGYLQGVSAALALLETVWQQRGSEARITELSEIFTTATRLEAQFWQMGLNATAETRA

Sequences:

>Translated_231_residues
MIVPAFSQGLYGRLRQLAAADWQRYVAHPFVQQLADGTLAENAFRRYLTQDYLFLIHFARSYALLVSKLRTLPEMRAAAA
SMNAILNELPLHVGYCAQWGISEPEMAAQPEAPETLNYTRYVLDIGHSGDALDLLVALMPCVAGYAEIGLGLLQHPATRL
DDNPYASWIRNYGDEGYLQGVSAALALLETVWQQRGSEARITELSEIFTTATRLEAQFWQMGLNATAETRA
>Mature_231_residues
MIVPAFSQGLYGRLRQLAAADWQRYVAHPFVQQLADGTLAENAFRRYLTQDYLFLIHFARSYALLVSKLRTLPEMRAAAA
SMNAILNELPLHVGYCAQWGISEPEMAAQPEAPETLNYTRYVLDIGHSGDALDLLVALMPCVAGYAEIGLGLLQHPATRL
DDNPYASWIRNYGDEGYLQGVSAALALLETVWQQRGSEARITELSEIFTTATRLEAQFWQMGLNATAETRA

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=204, Percent_Identity=26.4705882352941, Blast_Score=94, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6324997, Length=208, Percent_Identity=28.3653846153846, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6325378, Length=200, Percent_Identity=28, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 25713; Mature: 25713

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVPAFSQGLYGRLRQLAAADWQRYVAHPFVQQLADGTLAENAFRRYLTQDYLFLIHFAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
SYALLVSKLRTLPEMRAAAASMNAILNELPLHVGYCAQWGISEPEMAAQPEAPETLNYTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
YVLDIGHSGDALDLLVALMPCVAGYAEIGLGLLQHPATRLDDNPYASWIRNYGDEGYLQG
HEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCHHHHH
VSAALALLETVWQQRGSEARITELSEIFTTATRLEAQFWQMGLNATAETRA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIVPAFSQGLYGRLRQLAAADWQRYVAHPFVQQLADGTLAENAFRRYLTQDYLFLIHFAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
SYALLVSKLRTLPEMRAAAASMNAILNELPLHVGYCAQWGISEPEMAAQPEAPETLNYTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
YVLDIGHSGDALDLLVALMPCVAGYAEIGLGLLQHPATRLDDNPYASWIRNYGDEGYLQG
HEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCHHHHH
VSAALALLETVWQQRGSEARITELSEIFTTATRLEAQFWQMGLNATAETRA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]