Click here to switch to the map view.

The map label for this gene is yhhS [C]

Identifier: 238894686

GI number: 238894686

Start: 2571339

End: 2572526

Strand: Reverse

Name: yhhS [C]

Synonym: KP1_2692

Alternate gene names: 238894686

Gene position: 2572526-2571339 (Counterclockwise)

Preceding gene: 238894687

Following gene: 238894685

Centisome position: 49.01

GC content: 60.86

Gene sequence:

>1188_bases
ATGAGCACTTCCGTCAGCACTACACAACTCAATTTGCGCATTATTTCGATCGTTGTTTTTACCTGTATCTGCTATCTCTC
CATTGGTCTGCCGCTGGCCGTACTGCCGGGCTATATTCACTATCAGCTGGGCTACAGCACCTTTGTCGCCGGAATTGTGA
TCAGTCTGCAGTACATATCGACGCTGATAAGCCGGCCGCACGCCGGGCGCTACACCGATATCTGGGGGCCGAAAAAAGTG
GTCAGCCTTGGGATCGTCTGCTGCCTGCTCAGTGGCGCCTTCACGCTACTGGCGGTAGTCCTGCAGGCAACGCCGATGCT
GGCCATTGCCGCGCTGCTGGCGGGCCGGGTGTTTCTCGGCGTCGGCGAGAGCTTTACCGCCACCGGCGCCACCCTGTGGG
GGATCAAAACCGTCGGCGCGATCCACACGTCACGGGTTATCTCCTGGAACGGCGTGGCGACCTATGTGGCGATGGCGGTC
GGGGCGCCGCTGGGAGTTACCCTCAATCACTATTTTGGCATCAGCGGCTTTGCTACGGTGGTAGTGCTGGTCGCGGCCAT
CGGTCTGCTGTTCGCTCGTACCCGCCAGGACGTCAAGGTGACCGCCGGCGCCAGAGCGCCCTTTCACGCGGTGGTGCGAA
AAATCTGGCCTTACGGCCTGGGGCTGGCCTTTGGCACCGTCGGTTTCGGCGTTATCGCCACCTTTATCACCCTCTACTTC
GCCGCGCACAGCTGGCAGGGCGCCGCGTTTACCCTTTCGCTGTTCAGCGTCGGCTTTATCTGCGTTCGCCTGGTGCTGGG
AAATACCATTACCCGCTTTGGCGGAGTCCCGGTCTCCCTGGCCTGCTTCATCATTGAAAGTCTCGGCCTGCTGCTTATCT
GGCTGGCGCCATCAGCATGGATAGCCGGCGTCGGCGCCTTTCTCACCGGTTCGGGTTTCTCGCTGGTCTTTCCGGCTTTA
GGAGTTGAGGCGGTAAAACAGGTGGAAGAGCAAAATCAGGGAACCGCCCTCGGCACCTACTCGGCGTTTCTTGATCTGGC
GCAGGGCCTGACCGGGCCGCTGGCCGGCTGGGTCGCCGGGTTCTACGATCTCGCCACGCTGTATCTGCTGGCGGCGATCG
TGGTGGCGCTCGCATTCCTGCTGATTTTCCGCGTACATCGGCAACAGCGGCTTGTCGCCAGAGAGTAG

Upstream 100 bases:

>100_bases
ATATCGTTCCCGTCGGTTACCGATAAAACGCTGTCGCGCCTCGCCAGCGCCCTCACGGCGCGCTATGCTACACATCCCGT
TGTATTAACCTCTTATCCCT

Downstream 100 bases:

>100_bases
TGTGGCCCGGCTCGCGGGCCGCCGCGGTCCGATAACGCCGGCAAAAAATGAATCGGCAATTGACGACGATTCGGCTTCCG
TGCCAACATCCCGTCAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSTSVSTTQLNLRIISIVVFTCICYLSIGLPLAVLPGYIHYQLGYSTFVAGIVISLQYISTLISRPHAGRYTDIWGPKKV
VSLGIVCCLLSGAFTLLAVVLQATPMLAIAALLAGRVFLGVGESFTATGATLWGIKTVGAIHTSRVISWNGVATYVAMAV
GAPLGVTLNHYFGISGFATVVVLVAAIGLLFARTRQDVKVTAGARAPFHAVVRKIWPYGLGLAFGTVGFGVIATFITLYF
AAHSWQGAAFTLSLFSVGFICVRLVLGNTITRFGGVPVSLACFIIESLGLLLIWLAPSAWIAGVGAFLTGSGFSLVFPAL
GVEAVKQVEEQNQGTALGTYSAFLDLAQGLTGPLAGWVAGFYDLATLYLLAAIVVALAFLLIFRVHRQQRLVARE

Sequences:

>Translated_395_residues
MSTSVSTTQLNLRIISIVVFTCICYLSIGLPLAVLPGYIHYQLGYSTFVAGIVISLQYISTLISRPHAGRYTDIWGPKKV
VSLGIVCCLLSGAFTLLAVVLQATPMLAIAALLAGRVFLGVGESFTATGATLWGIKTVGAIHTSRVISWNGVATYVAMAV
GAPLGVTLNHYFGISGFATVVVLVAAIGLLFARTRQDVKVTAGARAPFHAVVRKIWPYGLGLAFGTVGFGVIATFITLYF
AAHSWQGAAFTLSLFSVGFICVRLVLGNTITRFGGVPVSLACFIIESLGLLLIWLAPSAWIAGVGAFLTGSGFSLVFPAL
GVEAVKQVEEQNQGTALGTYSAFLDLAQGLTGPLAGWVAGFYDLATLYLLAAIVVALAFLLIFRVHRQQRLVARE
>Mature_394_residues
STSVSTTQLNLRIISIVVFTCICYLSIGLPLAVLPGYIHYQLGYSTFVAGIVISLQYISTLISRPHAGRYTDIWGPKKVV
SLGIVCCLLSGAFTLLAVVLQATPMLAIAALLAGRVFLGVGESFTATGATLWGIKTVGAIHTSRVISWNGVATYVAMAVG
APLGVTLNHYFGISGFATVVVLVAAIGLLFARTRQDVKVTAGARAPFHAVVRKIWPYGLGLAFGTVGFGVIATFITLYFA
AHSWQGAAFTLSLFSVGFICVRLVLGNTITRFGGVPVSLACFIIESLGLLLIWLAPSAWIAGVGAFLTGSGFSLVFPALG
VEAVKQVEEQNQGTALGTYSAFLDLAQGLTGPLAGWVAGFYDLATLYLLAAIVVALAFLLIFRVHRQQRLVARE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family [H]

Homologues:

Organism=Escherichia coli, GI87082270, Length=388, Percent_Identity=51.8041237113402, Blast_Score=390, Evalue=1e-109,
Organism=Escherichia coli, GI1788662, Length=390, Percent_Identity=41.5384615384615, Blast_Score=266, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41715; Mature: 41584

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STSVSTTQLNLRIISIVVFTCICYLSIGLPLAVLPGYIHYQLGYSTFVAGIVISLQYIS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TLISRPHAGRYTDIWGPKKVVSLGIVCCLLSGAFTLLAVVLQATPMLAIAALLAGRVFLG
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VGESFTATGATLWGIKTVGAIHTSRVISWNGVATYVAMAVGAPLGVTLNHYFGISGFATV
CCCCCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCCCHHHHCCHHHHHHH
VVLVAAIGLLFARTRQDVKVTAGARAPFHAVVRKIWPYGLGLAFGTVGFGVIATFITLYF
HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AAHSWQGAAFTLSLFSVGFICVRLVLGNTITRFGGVPVSLACFIIESLGLLLIWLAPSAW
HHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
IAGVGAFLTGSGFSLVFPALGVEAVKQVEEQNQGTALGTYSAFLDLAQGLTGPLAGWVAG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
FYDLATLYLLAAIVVALAFLLIFRVHRQQRLVARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA